fgenesh1_pg.C_scaffold_23000018 (Phytophthora capsici)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.C_scaffold_23000018 T56560_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_23000018 RRM 88 158

Links

Other RRM family RBPs
Other Phytophthora capsici RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
s_467614 Phytophthora sojae s_467614 N 0.972
PITG_12876 Phytophthora infestans PITG_12876 N 0.958
fgenesh1_pg.C_scaffold_11000034 Phytophthora ramorum fgenesh1_pg.C_scaffold_11000034 N 0.944
estExt_Genewise1.C_30147 Volvox carteri estExt_Genewise1.C_30147 N 0.732
estExtDG_fgenesh_newKGs_kg.C_110065 Emiliania huxleyi estExtDG_fgenesh_newKGs_kg.C_110065 N 0.718
pasa_Sanger_mRNA18521 Chlamydomonas reinhardtii pasa_Sanger_mRNA18521 N 0.718
GSPATP00035306001 Paramecium tetraurelia GSPATP00035306001 N 0.718
estExt_Genewise1Plus.C_1180017 Capitella teleta estExt_Genewise1Plus.C_1180017 I 0.704
GP3.076550 Batrachochytrium dendrobatidis GP3.076550 I 0.704
gw1.13.451.1 Micromonas pusilla gw1.13.451.1 N 0.704