fgenesh1_pm.C_scaffold_139000002 (Selaginella moellendorfii)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		fgenesh1_pm.C_scaffold_139000002 T00942_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_139000002 CCCH ZF 150 169
fgenesh1_pm.C_scaffold_139000002 RRM 288 348

Links

Other CCCH ZF,RRM family RBPs
Other Selaginella moellendorfii RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.136.54.1 Physcomitrella patens e_gw1.136.54.1 N 0.788
e_gw1.31.137.1 Physcomitrella patens e_gw1.31.137.1 N 0.780
e_gw1.24.612.1 Selaginella moellendorfii e_gw1.24.612.1 N 0.732
estExt_fgenesh2_pg.C_00420 Selaginella moellendorfii estExt_fgenesh2_pg.C_00420 N 0.729
estExt_fgenesh2_pg.C_80472 Selaginella moellendorfii estExt_fgenesh2_pg.C_80472 N 0.741