UNK (Echinops telfairi)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSETEG00000019640 T02599_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000015954 CCCH ZF 138 153
ENSETEP00000015954 CCCH ZF 295 321

Links

Other CCCH ZF family RBPs
Other Echinops telfairi RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s17350g1t1 Acyrtosiphon pisum DGIL_AUG5s17350g1t1 N 0.000
Aqu1.225680 Amphimedon queenslandica Aqu1.225680 N 0.000
fgenesh2_pg.scaffold_5000153 Branchiostoma floridae fgenesh2_pg.scaffold_5000153 N 0.000
ENSCSAVG00000004843 Ciona savignyi ENSCSAVG00000004843 N 0.000
GK12832 Drosophila willistoni FBgn0214841 N 0.000
UNK Microcebus murinus ENSMICG00000007591 N 0.000
nasonia_NCBI_hmm1068274 Nasonia vitripennis nasonia_NCBI_hmm1068274 N 0.000
e_gw.10.245.1 Nematostella vectensis e_gw.10.245.1 N 0.000
UNK Oryzias latipes ENSORLG00000018637 N 0.000
UNK Otolemur garnettii ENSOGAG00000001922 N 0.000
XR_022366.1 Pan troglodytes ENSPTRG00000007591 N 0.822
XP_001180099.1 Strongylocentrotus purpuratus XP_001180099.1 N 0.000
XP_789013.2 Strongylocentrotus purpuratus XP_789013.2 N 0.000
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.800