CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TOE1
(
Ochotona princeps
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOPRG00000004057
T03104_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000003732
CCCH ZF
295
321
QPTSICDNFSAYGWCSLGPQCPRSHDI
Links
Other
CCCH ZF
family RBPs
Other
Ochotona princeps
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R007559
Ailuropoda melanoleuca
Ame_R007559
N
0.889
TOE1_BOVIN
Bos taurus
ENSBTAG00000011243
N
0.889
LOC100397152
Callithrix jacchus
ENSCJAG00000004716
N
0.889
TOE1
Canis familiaris
ENSCAFG00000004603
N
0.852
TOE1
Cavia porcellus
ENSCPOG00000012455
N
0.815
TOE1
Choloepus hoffmanni
ENSCHOG00000004270
N
0.889
TOE1
Dasypus novemcinctus
ENSDNOG00000015596
N
0.889
Toe1
Dipodomys ordii
ENSDORG00000007153
N
0.815
TOE1
Echinops telfairi
ENSETEG00000013367
N
0.852
TOE1
Equus caballus
ENSECAG00000023204
N
0.741
TOE1
Erinaceus europaeus
ENSEEUG00000015402
N
0.852
TOE1
Felis catus
ENSFCAG00000009566
N
0.889
TOE1
Gorilla gorilla
ENSGGOG00000003290
N
0.889
TOE1
Homo sapiens
ENSG00000132773
N
0.889
TOE1
Loxodonta africana
ENSLAFG00000017370
N
0.852
TOE1
Macaca mulatta
ENSMMUG00000020081
N
0.889
TOE1
Microcebus murinus
ENSMICG00000013614
N
0.815
Toe1
Mus musculus
ENSMUSG00000028688
N
0.778
TOE1
Myotis lucifugus
ENSMLUG00000005649
N
0.778
TOE1
Oryctolagus cuniculus
ENSOCUG00000017503
N
0.926
TOE1
Otolemur garnettii
ENSOGAG00000002298
N
0.852
TOE1
Pan troglodytes
ENSPTRG00000000672
N
0.889
ENSPPYG00000001414
Pongo pygmaeus
ENSPPYG00000001414
N
0.889
TOE1
Procavia capensis
ENSPCAG00000013351
N
0.852
TOE1
Pteropus vampyrus
ENSPVAG00000014998
N
0.815
Toe1
Rattus norvegicus
ENSRNOG00000017561
N
0.778
TOE1
Spermophilus tridecemlineatus
ENSSTOG00000010669
N
0.889
TOE1
Sus scrofa
ENSSSCG00000003918
N
0.852
TOE1
Tarsius syrichta
ENSTSYG00000011320
N
0.815
TOE1
Tursiops truncatus
ENSTTRG00000008815
N
0.889
TOE1
Vicugna pacos
ENSVPAG00000011731
N
0.889