CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TOE1_BOVIN
(
Bos taurus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSBTAG00000011243
T02258_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000014929
CCCH ZF
296
321
STSICDNFSAYGWCPLGPQCPRSHDI
ENSBTAP00000040666
CCCH ZF
296
321
STSICDNFSAYGWCPLGPQCPRSHDI
Links
Other
CCCH ZF
family RBPs
Other
Bos taurus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TOE1
Vicugna pacos
ENSVPAG00000011731
N
1.000
TOE1
Felis catus
ENSFCAG00000009566
N
1.000
TOE1
Tursiops truncatus
ENSTTRG00000008815
N
1.000
TOE1
Oryctolagus cuniculus
ENSOCUG00000017503
N
0.962
TOE1
Sus scrofa
ENSSSCG00000003918
N
0.962
TOE1
Canis familiaris
ENSCAFG00000004603
N
0.962
Ame_R007559
Ailuropoda melanoleuca
Ame_R007559
N
0.923
TOE1
Spermophilus tridecemlineatus
ENSSTOG00000010669
N
0.923
ENSPPYG00000001414
Pongo pygmaeus
ENSPPYG00000001414
N
0.923
TOE1
Pteropus vampyrus
ENSPVAG00000014998
N
0.923
TOE1
Pan troglodytes
ENSPTRG00000000672
N
0.923
TOE1
Microcebus murinus
ENSMICG00000013614
N
0.923
TOE1
Macaca mulatta
ENSMMUG00000020081
N
0.923
TOE1
Homo sapiens
ENSG00000132773
N
0.923
TOE1
Choloepus hoffmanni
ENSCHOG00000004270
N
0.923
TOE1
Dasypus novemcinctus
ENSDNOG00000015596
N
0.923
TOE1
Gorilla gorilla
ENSGGOG00000003290
N
0.923
TOE1
Otolemur garnettii
ENSOGAG00000002298
N
0.889
TOE1
Erinaceus europaeus
ENSEEUG00000015402
N
0.889
TOE1
Ochotona princeps
ENSOPRG00000004057
N
0.889
TOE1
Cavia porcellus
ENSCPOG00000012455
N
0.885
TOE1
Loxodonta africana
ENSLAFG00000017370
N
0.885
TOE1
Procavia capensis
ENSPCAG00000013351
N
0.885
LOC100397152
Callithrix jacchus
ENSCJAG00000004716
N
0.885
TOE1
Myotis lucifugus
ENSMLUG00000005649
N
0.885
Toe1
Mus musculus
ENSMUSG00000028688
N
0.846
TOE1
Tarsius syrichta
ENSTSYG00000011320
N
0.846
Toe1
Dipodomys ordii
ENSDORG00000007153
N
0.846
TOE1
Equus caballus
ENSECAG00000023204
N
0.846
Toe1
Rattus norvegicus
ENSRNOG00000017561
N
0.846
TOE1
Echinops telfairi
ENSETEG00000013367
N
0.808
TOE1
Monodelphis domestica
ENSMODG00000002430
N
0.731