CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TOE1
(
Myotis lucifugus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMLUG00000005649
T02887_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000005163
CCCH ZF
294
319
STVICDNFSAYGWCPLGSQCSRSHDI
Links
Other
CCCH ZF
family RBPs
Other
Myotis lucifugus
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TOE1
Tursiops truncatus
ENSTTRG00000008815
N
0.885
TOE1_BOVIN
Bos taurus
ENSBTAG00000011243
N
0.885
TOE1
Felis catus
ENSFCAG00000009566
N
0.885
TOE1
Pteropus vampyrus
ENSPVAG00000014998
N
0.885
TOE1
Vicugna pacos
ENSVPAG00000011731
N
0.885
TOE1
Oryctolagus cuniculus
ENSOCUG00000017503
N
0.846
TOE1
Sus scrofa
ENSSSCG00000003918
N
0.846
TOE1
Canis familiaris
ENSCAFG00000004603
N
0.846
TOE1
Erinaceus europaeus
ENSEEUG00000015402
N
0.815
TOE1
Equus caballus
ENSECAG00000023204
N
0.808
TOE1
Procavia capensis
ENSPCAG00000013351
N
0.808
TOE1
Dasypus novemcinctus
ENSDNOG00000015596
N
0.808
TOE1
Homo sapiens
ENSG00000132773
N
0.808
TOE1
Microcebus murinus
ENSMICG00000013614
N
0.808
TOE1
Gorilla gorilla
ENSGGOG00000003290
N
0.808
ENSPPYG00000001414
Pongo pygmaeus
ENSPPYG00000001414
N
0.808
TOE1
Choloepus hoffmanni
ENSCHOG00000004270
N
0.808
Ame_R007559
Ailuropoda melanoleuca
Ame_R007559
N
0.808
TOE1
Spermophilus tridecemlineatus
ENSSTOG00000010669
N
0.808
TOE1
Pan troglodytes
ENSPTRG00000000672
N
0.808
TOE1
Macaca mulatta
ENSMMUG00000020081
N
0.808
TOE1
Otolemur garnettii
ENSOGAG00000002298
N
0.778
TOE1
Ochotona princeps
ENSOPRG00000004057
N
0.778
TOE1
Loxodonta africana
ENSLAFG00000017370
N
0.769
Toe1
Rattus norvegicus
ENSRNOG00000017561
N
0.769
LOC100397152
Callithrix jacchus
ENSCJAG00000004716
N
0.769
Toe1
Mus musculus
ENSMUSG00000028688
N
0.769
Toe1
Dipodomys ordii
ENSDORG00000007153
N
0.769
TOE1
Cavia porcellus
ENSCPOG00000012455
N
0.769
TOE1
Tarsius syrichta
ENSTSYG00000011320
N
0.731