XM_002867375.1 (Arabidopsis lyrata)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgenesh2_kg.7__1270__AT4G29190.1 T03857_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.7__1270__AT4G29190.1 CCCH ZF 120 145

Links

Other CCCH ZF family RBPs
Other Arabidopsis lyrata RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.19.315.1 Coccomyxa C 169 e_gw1.19.315.1 N 0.731
MDP0000501598 Malus x domestica MDP0000501598 N 0.846
MDP0000841002 Malus x domestica MDP0000841002 N 0.885
Medtr3g140460 Medicago truncatula Medtr3g140460 N 0.704
LOC_Os04g41060 Oryza sativa LOC_Os04g41060 N 0.769
EuGene.0400010508 Ostreococcus RCC809 EuGene.0400010508 N 0.769
ppa007432m Prunus persica ppa007432m N 0.846
SB09G006050 Sorghum bicolor Sb09g006050 N 0.846
GSVIVG00035331001 Vitis vinifera GSVIVG00035331001 N 0.923