MDP0000841002 (Malus x domestica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 MDP0000841002 T06403_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000841002 CCCH ZF 134 159

Links

Other CCCH ZF family RBPs
Other Malus x domestica RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000501598 Malus x domestica MDP0000501598 N 0.962
ppa007432m Prunus persica ppa007432m N 0.923
XM_002867375.1 Arabidopsis lyrata fgenesh2_kg.7__1270__AT4G29190.1 N 0.885
GSVIVG00035331001 Vitis vinifera GSVIVG00035331001 N 0.846
SB09G006050 Sorghum bicolor Sb09g006050 N 0.808
EuGene.0400010508 Ostreococcus RCC809 EuGene.0400010508 N 0.769
Cucsa.094060 Cucumis sativus Cucsa.094060 N 0.731
Medtr3g140460 Medicago truncatula Medtr3g140460 N 0.704