CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
EuGene.0400010508
(
Ostreococcus RCC809
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
EuGene.0400010508
T05192_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
EuGene.0400010508
CCCH ZF
231
256
YSGTACPEFRKGSCPRGDVCEYAHGV
Links
Other
CCCH ZF
family RBPs
Other
Ostreococcus RCC809
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ELAVL4
Felis catus
ENSFCAG00000010438
N
0.000
ELAVL2
Felis catus
ENSFCAG00000011976
N
0.000
ELAVL2
Homo sapiens
ENSG00000107105
D
0.000
ELAVL3
Macaca mulatta
ENSMMUG00000020616
N
0.000
ELAVL3
Ochotona princeps
ENSOPRG00000007373
N
0.000