Sb01g011910 (Sorghum bicolor)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		Sb01g011910 T07423_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb01g011910.1 RRM 9 79
Sb01g011910.1 CCHC ZF 114 131
Sb01g011910.2 CCHC ZF 47 64

Links

Other CCHC ZF,RRM family RBPs
Other Sorghum bicolor RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002882206.1 Arabidopsis lyrata scaffold_300229.1 N 0.778
AT3G02820 Arabidopsis thaliana AT3G02820-TAIR-G N 0.778
BRADI1G12460 Brachypodium distachyon BRADI1G12460 N 0.820
BRADI1G32480 Brachypodium distachyon BRADI1G32480 N 0.778
BRADI1G29530 Brachypodium distachyon BRADI1G29530 N 0.778
PK15492.1 Cannabis sativa PK15492.1 N 0.722
Cucsa.132860 Cucumis sativus Cucsa.132860 N 0.722
LjT04D09.40.nd Lotus japonicus LjT04D09.40.nd N 0.722
MDP0000186936 Malus x domestica MDP0000186936 N 0.778
MDP0000284515 Malus x domestica MDP0000284515 N 0.722
MDP0000277069 Malus x domestica MDP0000277069 N 0.722
MDP0000088428 Malus x domestica MDP0000088428 N 0.708
mgf001569m Mimulus guttatus mgf001569m N 0.722
BGIOSIBCE008748 Oryza indica BGIOSIBCE008748 N 0.722
BGIOSIBCE012515 Oryza indica BGIOSIBCE012515 N 0.854
LOC_Os02g52460 Oryza sativa LOC_Os02g52460 N 0.722
LOC_Os03g47800 Oryza sativa LOC_Os03g47800 N 0.854
ppa009221m Prunus persica ppa009221m N 0.722
ppa009799m Prunus persica ppa009799m N 0.708
SB10G031080 Sorghum bicolor Sb10g031080 N 0.778
GSVIVG00010231001 Vitis vinifera GSVIVG00010231001 N 0.722
GRMZM2G057571 Zea mays GRMZM2G057571 N 0.778
GRMZM2G161242 Zea mays GRMZM2G161242 N 0.944
GRMZM2G083783 Zea mays GRMZM2G083783 N 0.955