CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TEQG_03563
(
Trichophyton equinum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
TEQG_03563
T08716_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TEQG_03563T0
CCHC ZF
51
68
DTCRNCGQAGHFARECPE
TEQG_03563T0
CCHC ZF
74
91
GACFNCGQEGHNKSDCPN
TEQG_03563T0
CCHC ZF
97
114
GTCRVCEKEGHPAAECPD
TEQG_03563T0
CCHC ZF
118
135
DICKNCKGEGHKTMECTE
TEQG_03563T0
CCHC ZF
266
283
PKCSNCGKMGHIMKSCKE
TEQG_03563T0
CCHC ZF
293
310
VKCVNCKQPGHRARDCKE
TEQG_03563T0
CCHC ZF
316
330
FACRNCGKGGHRSND
TEQG_03563T0
CCHC ZF
340
357
VECKRCNEVGHFAKDCPQ
TEQG_03563T0
CCHC ZF
362
379
RACRNCGSEDHIARDCDQ
TEQG_03563T0
CCHC ZF
386
403
VTCRNCEEMGHFSRDCTK
TEQG_03563T0
CCHC ZF
410
427
VKCSCCGEMGHTIRRCPQ
Links
Other
CCHC ZF
family RBPs
Other
Trichophyton equinum
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_052060
Aspergillus clavatus
CADACLAG00004960
N
0.763
AFLA_051900
Aspergillus flavus
CADAFLAG00011181
N
0.722
An01g08710
Aspergillus niger
CADANGAG00000871
N
0.747
MCYG_01078
Microsporum canis
MCYG_01078
N
0.934
MGYG_01625
Microsporum gypseum
MGYG_01625
N
0.939
NFIA_103290
Neosartorya fischeri
CADNFIAG00009514
N
0.753
PMAA_080680
Penicillium marneffei
PMAA_080680
N
0.707
TERG_07493
Trichophyton rubrum
TERG_07493
N
0.965
TESG_06577
Trichophyton tonsurans
TESG_06577
N
1.000