PMAA_080680 (Penicillium marneffei)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PMAA_080680 T16213_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_080680.t1 CCHC ZF 44 61
PMAA_080680.t1 CCHC ZF 68 85
PMAA_080680.t1 CCHC ZF 91 108
PMAA_080680.t1 CCHC ZF 112 129
PMAA_080680.t1 CCHC ZF 262 279
PMAA_080680.t1 CCHC ZF 289 306
PMAA_080680.t1 CCHC ZF 314 331
PMAA_080680.t1 CCHC ZF 338 355
PMAA_080680.t1 CCHC ZF 361 378
PMAA_080680.t1 CCHC ZF 385 402
PMAA_080680.t1 CCHC ZF 409 420

Links

Other CCHC ZF family RBPs
Other Penicillium marneffei RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TERG_07493 Trichophyton rubrum TERG_07493 N 0.712
TESG_06577 Trichophyton tonsurans TESG_06577 N 0.707
TEQG_03563 Trichophyton equinum TEQG_03563 N 0.707
MCYG_01078 Microsporum canis MCYG_01078 N 0.707
MGYG_01625 Microsporum gypseum MGYG_01625 N 0.702