CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_01625
(
Microsporum gypseum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
MGYG_01625
T08093_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_01625T0
CCHC ZF
48
65
DTCRNCGQAGHFARECPE
MGYG_01625T0
CCHC ZF
71
88
GACFNCGQEGHNKSDCPN
MGYG_01625T0
CCHC ZF
94
111
GTCRICEKEGHPAAQCPD
MGYG_01625T0
CCHC ZF
115
132
DICKNCKAEGHKTMECTE
MGYG_01625T0
CCHC ZF
263
280
PKCSNCGQMGHIMKSCKE
MGYG_01625T0
CCHC ZF
290
307
VKCVNCKQPGHRARDCKE
MGYG_01625T0
CCHC ZF
313
330
FACRNCGKGGHRSNECTE
MGYG_01625T0
CCHC ZF
337
354
VECKRCNEVGHFAKDCPQ
MGYG_01625T0
CCHC ZF
359
376
RACRNCGSEDHMVKDCDQ
MGYG_01625T0
CCHC ZF
383
400
VTCHNCEEMGHFSRDCTK
MGYG_01625T0
CCHC ZF
407
424
VKCSCCGEMGHTIRRCPQ
Links
Other
CCHC ZF
family RBPs
Other
Microsporum gypseum
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_07493
Trichophyton rubrum
TERG_07493
N
0.955
TEQG_03563
Trichophyton equinum
TEQG_03563
N
0.939
TESG_06577
Trichophyton tonsurans
TESG_06577
N
0.939
MCYG_01078
Microsporum canis
MCYG_01078
N
0.929
NFIA_103290
Neosartorya fischeri
CADNFIAG00009514
N
0.747
ACLA_052060
Aspergillus clavatus
CADACLAG00004960
N
0.747
An01g08710
Aspergillus niger
CADANGAG00000871
N
0.747
AFLA_051900
Aspergillus flavus
CADAFLAG00011181
N
0.712
PMAA_080680
Penicillium marneffei
PMAA_080680
N
0.702