LOC_Os04g12210 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g12210 T11180_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g12210.1 CCHC ZF 632 649

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

237 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R012491 Ailuropoda melanoleuca Ame_R012491 N 0.000
YTHDC2 Anolis carolinensis ENSACAG00000007754 N 0.000
YTHDC2 Bos taurus ENSBTAG00000014099 N 0.000
YTHDC2 Callithrix jacchus ENSCJAG00000016598 N 0.000
YTHDC2 Canis familiaris ENSCAFG00000000224 N 0.000
YTHDC2 Cavia porcellus ENSCPOG00000000272 N 0.000
YTHDC2 Choloepus hoffmanni ENSCHOG00000013323 N 0.000
GSC2 Danio rerio ENSDARG00000076491 N 0.000
YTHDC2 Dasypus novemcinctus ENSDNOG00000012198 N 0.000
Ythdc2 Dipodomys ordii ENSDORG00000007057 N 0.000
YTHDC2 Echinops telfairi ENSETEG00000013681 N 0.000
YTHDC2 Equus caballus ENSECAG00000020630 N 0.000
YTHDC2 Erinaceus europaeus ENSEEUG00000008580 N 0.000
YTHDC2 Gallus gallus ENSGALG00000000189 N 0.000
ENSGACG00000018573 Gasterosteus aculeatus ENSGACG00000018573 N 0.000
YTHDC2 Gorilla gorilla ENSGGOG00000014407 N 0.000
YTHDC2 Homo sapiens ENSG00000047188 N 0.000
YTHDC2 Loxodonta africana ENSLAFG00000003538 N 0.000
YTHDC2 Macaca mulatta ENSMMUG00000001376 N 0.000
YTHDC2 Macropus eugenii ENSMEUG00000004414 N 0.000
YTHDC2 Microcebus murinus ENSMICG00000004030 N 0.000
YTHDC2 Monodelphis domestica ENSMODG00000015671 N 0.000
Ythdc2 Mus musculus ENSMUSG00000034653 N 0.000
YTHDC2 Myotis lucifugus ENSMLUG00000006106 N 0.000
e_gw.87.3.1 Nematostella vectensis e_gw.87.3.1 N 0.000
YTHDC2 Ochotona princeps ENSOPRG00000000462 N 0.000
ENSOANG00000005058 Ornithorhynchus anatinus ENSOANG00000005058 N 0.000
YTHDC2 Oryctolagus cuniculus ENSOCUG00000012096 N 0.000
YTHDC2 Oryzias latipes ENSORLG00000019098 N 0.000
YTHDC2 Otolemur garnettii ENSOGAG00000001618 N 0.000
YTHDC2 Pan troglodytes ENSPTRG00000017143 N 0.000
ENSPPYG00000015691 Pongo pygmaeus ENSPPYG00000015691 N 0.000
YTHDC2 Procavia capensis ENSPCAG00000007733 N 0.000
YTHDC2 Pteropus vampyrus ENSPVAG00000012364 N 0.000
YTHDC2 Sorex araneus ENSSARG00000000924 N 0.000
YTHDC2 Sus scrofa ENSSSCG00000014211 N 0.000
YTHDC2 Taeniopygia guttata ENSTGUG00000003755 N 0.000
YTHDC2 Takifugu rubripes ENSTRUG00000006717 N 0.000
YTHDC2 Tarsius syrichta ENSTSYG00000009634 N 0.000
YTHDC2 Tupaia belangeri ENSTBEG00000006872 N 0.000
YTHDC2 Tursiops truncatus ENSTTRG00000003116 N 0.000
ythdc2 Xenopus tropicalis ENSXETG00000021517 N 0.000