LOC_Os06g17780 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g17780 T11593_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g17780.1 CCHC ZF 211 228
LOC_Os06g17780.1 CCHC ZF 312 329
LOC_Os06g17780.1 CCHC ZF 348 364
LOC_Os06g17780.1 CCHC ZF 420 437
LOC_Os06g17780.1 CCHC ZF 532 546

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSPATP00005059001 Paramecium tetraurelia GSPATP00005059001 N 0.000
GSPATP00017515001 Paramecium tetraurelia GSPATP00017515001 N 0.000
GSPATP00018910001 Paramecium tetraurelia GSPATP00018910001 N 0.000
GSPATP00024551001 Paramecium tetraurelia GSPATP00024551001 N 0.000
GSPATP00038282001 Paramecium tetraurelia GSPATP00038282001 N 0.000