Medtr1g121690 (Medicago truncatula)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Medtr1g121690 T15075_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr1g121690.1 CCHC ZF 546 563

Links

Other CCHC ZF family RBPs
Other Medicago truncatula RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s6024g1t1 Acyrtosiphon pisum DGIL_AUG5s6024g1t1 N 0.000
AAEL000695 Aedes aegypti AAEL000695 I 0.000
AAEL014033 Aedes aegypti AAEL014033 I 0.000
AGAP009477 Anopheles gambiae AGAP009477 N 0.000
AGAP004950 Anopheles gambiae AGAP004950 I 0.000
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.000
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.000
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.000
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.000
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.000
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.000
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.000
GF10965 Drosophila ananassae FBgn0088005 I 0.000
GG13757 Drosophila erecta FBgn0106020 I 0.000
GH14684 Drosophila grimshawi FBgn0122160 I 0.000
bru-3 Drosophila melanogaster FBgn0262350 D 0.000
aret Drosophila melanogaster FBgn0000114 D 0.000
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.000
GI13095 Drosophila mojavensis FBgn0135852 I 0.000
GL18622 Drosophila persimilis FBgn0156223 N 0.000
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.000
GA25731-RA Drosophila pseudoobscura FBgn0247108 N 0.000
GM24582 Drosophila sechellia FBgn0179445 I 0.000
GD12651 Drosophila simulans FBgn0184378 I 0.000
GJ13842 Drosophila virilis FBgn0201061 I 0.000
GK17101 Drosophila willistoni FBgn0219100 I 0.000
GE20053 Drosophila yakuba FBgn0237378 I 0.000
GE18585 Drosophila yakuba FBgn0235992 N 0.000
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.000
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.000
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.000
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.000
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.000
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.000
LOAG_05508 Loa loa LOAG_05508 I 0.000
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.000
Celf6 Mus musculus ENSMUSG00000032297 I 0.000
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.000
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.000
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.000
CELF6 Oryzias latipes ENSORLG00000013392 I 0.000
PHUM315130 Pediculus humanus PHUM315130 I 0.000
PHUM533900 Pediculus humanus PHUM533900 N 0.000
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.000
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.000
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.000
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.000
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.000