PCBP4 (Cavia porcellus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCPOG00000014617 T18582_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.747
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.711
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.711
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.700
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000013171 KH 19 79
ENSCPOP00000013171 KH 103 166
ENSCPOP00000013171 KH 243 305

Links

Other KH family RBPs
Other Cavia porcellus RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CJA14711 Caenorhabditis japonica CJA14711 N 0.000
PK11721.1 Cannabis sativa PK11721.1 N 0.000
fgenesh1_pg.C_scaffold_1459000002 Capitella teleta fgenesh1_pg.C_scaffold_1459000002 N 0.000
Cucsa.265830 Cucumis sativus Cucsa.265830 N 0.000
Glyma13g21780.1 Glycine max Glyma13g21780.1 N 0.000
Glyma02g36930.1 Glycine max Glyma02g36930.1 N 0.000
Pa_3_11180 Podospora anserina Pa_3_11180 N 0.000
SPPG_00438 Spizellomyces punctatus SPPG_00438 N 0.000
SPPG_08808 Spizellomyces punctatus SPPG_08808 N 0.000
SPPG_08805 Spizellomyces punctatus SPPG_08805 N 0.000
SPPG_08561 Spizellomyces punctatus SPPG_08561 N 0.000
SPPG_01770 Spizellomyces punctatus SPPG_01770 N 0.000
SPPG_03316 Spizellomyces punctatus SPPG_03316 N 0.000
SPPG_03725 Spizellomyces punctatus SPPG_03725 N 0.000
SPPG_03727 Spizellomyces punctatus SPPG_03727 N 0.000
SPPG_06303 Spizellomyces punctatus SPPG_06303 N 0.000
SPPG_08320 Spizellomyces punctatus SPPG_08320 N 0.000
SPPG_08560 Spizellomyces punctatus SPPG_08560 N 0.000
XP_001191181.1 Strongylocentrotus purpuratus XP_001191181.1 N 0.000
XP_001201402.1 Strongylocentrotus purpuratus XP_001201402.1 N 0.000