PCBP4 (Cavia porcellus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCPOG00000014617 T18582_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.747
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.711
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.711
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.700
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000013171 KH 19 79
ENSCPOP00000013171 KH 103 166
ENSCPOP00000013171 KH 243 305

Links

Other KH family RBPs
Other Cavia porcellus RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.000
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.000
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.700
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.711
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.747
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.774
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.936
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.737
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.711
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.995
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.700
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.000
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.000
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.995
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.000
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.747
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.705
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.000
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.000
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.700
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.000
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.995
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.711
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.711
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.747
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.700
pcbp3 Danio rerio ENSDARG00000054378 I 0.000
pcbp2 Danio rerio ENSDARG00000013184 D 0.711
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.711
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.000
LOC100060660 Equus caballus ENSECAG00000024218 I 0.995
PCBP2 Equus caballus ENSECAG00000022389 I 0.711
LOC100050101 Equus caballus ENSECAG00000012413 I 0.747
LOC100050579 Equus caballus ENSECAG00000002544 I 0.700
PCBP3 Felis catus ENSFCAG00000014812 I 0.000
PCBP3 Gallus gallus ENSGALG00000013155 I 0.768
PCBP3 Gallus gallus ENSGALG00000004394 I 0.721
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.737
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.000
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.000
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.714
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.772
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.737
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.747
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.995
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.700
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.711
PCBP1 Homo sapiens ENSG00000169564 D 0.700
PCBP4 Homo sapiens ENSG00000090097 I 0.995
PCBP2 Homo sapiens ENSG00000197111 D 0.711
PCBP3 Homo sapiens ENSG00000183570 I 0.747
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.000
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.000
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.711
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.747
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.995
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.711
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.726
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.000
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.747
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.737
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.000
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.711
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.000
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.711
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.000
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.747
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.711
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.700
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.995
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.700
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.000
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.000
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.711
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.000
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.963
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.995
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.711
ENSOCUG00000021452 Oryctolagus cuniculus ENSOCUG00000021452 I 0.000
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.700
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.747
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.700
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.732
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.712
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.705
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.000
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.000
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.995
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.747
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.700
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.711
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.995
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.700
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.711
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.711
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.000
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.711
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.000
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.700
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.747
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.000
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.000
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.995
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.711
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.000
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.763
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.737
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.772
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.000
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.705
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.709
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.732
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.000
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.737
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.767
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.000
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.000
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.747
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.711
AAH41241 Xenopus laevis AAH41241 I 0.716
AAH84195 Xenopus laevis AAH84195 I 0.716
CAB50743 Xenopus laevis CAB50743 I 0.716
CAD29864 Xenopus laevis CAD29864 I 0.716
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.716