Pcbp1 (Mus musculus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMUSG00000051695 T19140_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp1
M207_0.6		 Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		1.000
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.936
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.910
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.862
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M207_0.6 KH 15 75
M207_0.6 KH 99 162
M207_0.6 KH 281 343

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000054863 KH 15 75
ENSMUSP00000054863 KH 99 162
ENSMUSP00000054863 KH 281 343

Links

Other KH family RBPs
Other Mus musculus RBPs

126 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 1.000
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 1.000
PCBP1 Pan troglodytes ENSPTRG00000012025 I 1.000
PCBP1 Cavia porcellus ENSCPOG00000013511 I 1.000
LOC100050579 Equus caballus ENSECAG00000002544 I 1.000
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 1.000
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 1.000
PCBP1 Homo sapiens ENSG00000169564 D 1.000
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 1.000
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 1.000
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 1.000
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.979
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.963
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.957
PCBP2 Equus caballus ENSECAG00000022389 I 0.936
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.936
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.936
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.936
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.936
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.936
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.936
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.936
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.936
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.936
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.936
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.936
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.936
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.936
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.936
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.936
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.936
PCBP2 Homo sapiens ENSG00000197111 D 0.936
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.936
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.936
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.936
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.931
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.926
AAH84195 Xenopus laevis AAH84195 I 0.926
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.926
CAD29864 Xenopus laevis CAD29864 I 0.926
CAB50743 Xenopus laevis CAB50743 I 0.926
AAH41241 Xenopus laevis AAH41241 I 0.926
pcbp2 Danio rerio ENSDARG00000013184 D 0.910
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.899
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.899
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.894
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.894
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.888
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.888
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.878
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.878
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.867
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.862
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.862
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.862
PCBP3 Homo sapiens ENSG00000183570 I 0.862
LOC100050101 Equus caballus ENSECAG00000012413 I 0.862
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.862
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.862
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.862
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.862
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.862
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.862
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.862
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.862
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.862
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.856
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.851
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.851
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.851
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.851
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.851
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.851
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.851
PCBP3 Gallus gallus ENSGALG00000013155 I 0.851
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.846
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.835
PCBP3 Gallus gallus ENSGALG00000004394 I 0.835
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.833
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.820
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.820
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.819
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.815
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.815
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.812
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.803
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.798
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.782
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.782
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.771
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.767
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.766
pcbp3 Danio rerio ENSDARG00000054378 I 0.766
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.766
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.766
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.755
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.750
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.746
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.741
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.741
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.737
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.735
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.730
PCBP3 Felis catus ENSFCAG00000014812 I 0.729
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.729
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.726
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.720
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.720
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.716
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.713
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.711
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.705
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.705
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.705
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.705
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.705
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.705
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.705
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.705
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.705
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.705
PCBP4 Homo sapiens ENSG00000090097 I 0.705
LOC100060660 Equus caballus ENSECAG00000024218 I 0.705
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.700
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.700
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.700