CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GL17545
(
Drosophila persimilis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0155148
T19922_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0181652
KH
111
188
QKVHVPIKDKKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHVEVSTIAP
Links
Other
KH
family RBPs
Other
Drosophila persimilis
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GF11890
Drosophila ananassae
FBgn0088930
N
1.000
GG22189
Drosophila erecta
FBgn0114363
N
0.987
GH21366
Drosophila grimshawi
FBgn0128828
N
1.000
qkr58E-2
Drosophila melanogaster
FBgn0022985
N
0.987
GI20561
Drosophila mojavensis
FBgn0143297
N
1.000
GL11428
Drosophila persimilis
FBgn0149037
N
0.702
GA19155-RA
Drosophila pseudoobscura
FBgn0079152
N
1.000
GA18453-RA
Drosophila pseudoobscura
FBgn0078455
N
0.702
GM15910
Drosophila sechellia
FBgn0170826
N
0.987
GD11668
Drosophila simulans
FBgn0183408
N
0.987
GJ22415
Drosophila virilis
FBgn0209527
N
0.987
GK20819
Drosophila willistoni
FBgn0222815
N
0.906
GE14183
Drosophila yakuba
FBgn0231805
N
0.987