CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GG22189
(
Drosophila erecta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0114363
T19860_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0140735
KH
130
207
QKVHVPIKDKKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRDREEELRNSADAKYAHLNLPLHVEVSTIAP
Links
Other
KH
family RBPs
Other
Drosophila erecta
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GE14183
Drosophila yakuba
FBgn0231805
N
1.000
GA19155-RA
Drosophila pseudoobscura
FBgn0079152
N
0.987
GF11890
Drosophila ananassae
FBgn0088930
N
0.987
GH21366
Drosophila grimshawi
FBgn0128828
N
0.987
GJ22415
Drosophila virilis
FBgn0209527
N
0.987
GI20561
Drosophila mojavensis
FBgn0143297
N
0.987
GL17545
Drosophila persimilis
FBgn0155148
N
0.987
GM15910
Drosophila sechellia
FBgn0170826
N
0.974
qkr58E-2
Drosophila melanogaster
FBgn0022985
N
0.974
GD11668
Drosophila simulans
FBgn0183408
N
0.974
GK20819
Drosophila willistoni
FBgn0222815
N
0.894
GA18453-RA
Drosophila pseudoobscura
FBgn0078455
N
0.702
GL11428
Drosophila persimilis
FBgn0149037
N
0.702