CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GM15910
(
Drosophila sechellia
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0170826
T19938_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0197387
KH
130
206
QKVHVPIKDKKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHVEVSTIA
Links
Other
KH
family RBPs
Other
Drosophila sechellia
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
qkr58E-2
Drosophila melanogaster
FBgn0022985
N
1.000
GD11668
Drosophila simulans
FBgn0183408
N
1.000
GH21366
Drosophila grimshawi
FBgn0128828
N
0.987
GI20561
Drosophila mojavensis
FBgn0143297
N
0.987
GL17545
Drosophila persimilis
FBgn0155148
N
0.987
GF11890
Drosophila ananassae
FBgn0088930
N
0.987
GA19155-RA
Drosophila pseudoobscura
FBgn0079152
N
0.987
GJ22415
Drosophila virilis
FBgn0209527
N
0.974
GE14183
Drosophila yakuba
FBgn0231805
N
0.974
GG22189
Drosophila erecta
FBgn0114363
N
0.974
GK20819
Drosophila willistoni
FBgn0222815
N
0.906