LARP1 (Takifugu rubripes)
La

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La) IPR006630 ENSTRUG00000009470 T22876_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000023787 La 337 394
ENSTRUP00000023788 La 397 454
ENSTRUP00000023789 La 202 259
ENSTRUP00000023790 La 280 337
ENSTRUP00000023792 La 175 232
ENSTRUP00000023793 La 129 186

Links

Other La family RBPs
Other Takifugu rubripes RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005086 Ailuropoda melanoleuca Ame_R005086 N 0.845
Ame_R010453 Ailuropoda melanoleuca Ame_R010453 N 0.845
LARP1 Anolis carolinensis ENSACAG00000004071 N 0.879
LARP1B Anolis carolinensis ENSACAG00000011338 N 0.879
LARP1 Bos taurus ENSBTAG00000008443 N 0.828
LARP1B Bos taurus ENSBTAG00000012135 N 0.845
LOC100393482 Callithrix jacchus ENSCJAG00000004454 N 0.845
LARP1B Callithrix jacchus ENSCJAG00000003338 N 0.810
LARP1 Canis familiaris ENSCAFG00000017639 N 0.845
LARP1B Canis familiaris ENSCAFG00000003831 N 0.845
LARP1 Cavia porcellus ENSCPOG00000003377 N 0.845
LARP1B Choloepus hoffmanni ENSCHOG00000005354 N 0.862
ENSCING00000003088 Ciona intestinalis ENSCING00000003088 N 0.717
larp1 Danio rerio ENSDARG00000018434 N 0.828
LARP1B Dasypus novemcinctus ENSDNOG00000018765 N 0.845
LARP1 Dasypus novemcinctus ENSDNOG00000012073 N 0.845
Larp1 Dipodomys ordii ENSDORG00000002897 N 0.845
ENSDORG00000013445 Dipodomys ordii ENSDORG00000013445 N 0.759
GF16129 Drosophila ananassae FBgn0093151 N 0.700
GH13999 Drosophila grimshawi FBgn0121475 N 0.700
GI24848 Drosophila mojavensis FBgn0147568 N 0.700
GJ24490 Drosophila virilis FBgn0211570 N 0.717
GK22522 Drosophila willistoni FBgn0224499 N 0.717
LARP1 Echinops telfairi ENSETEG00000020251 N 0.845
LARP1B Echinops telfairi ENSETEG00000012497 N 0.776
LARP1 Equus caballus ENSECAG00000017002 N 0.845
LOC100071865 Equus caballus ENSECAG00000001088 N 0.845
LARP1 Erinaceus europaeus ENSEEUG00000001065 N 0.724
LARP1 Felis catus ENSFCAG00000000592 N 0.845
LARP1 Gallus gallus ENSGALG00000004001 N 0.845
LARP2 Gallus gallus ENSGALG00000010207 N 0.862
LARP1B Gasterosteus aculeatus ENSGACG00000004609 N 0.828
ENSGGOG00000024102 Gorilla gorilla ENSGGOG00000024102 N 0.845
ENSGGOG00000006048 Gorilla gorilla ENSGGOG00000006048 N 0.845
LARP1 Homo sapiens ENSG00000155506 N 0.845
LARP1B Homo sapiens ENSG00000138709 N 0.810
LARP1 Loxodonta africana ENSLAFG00000008991 N 0.845
ENSLAFG00000008473 Loxodonta africana ENSLAFG00000008473 N 0.845
LARP1B Macaca mulatta ENSMMUG00000021347 N 0.810
LARP1 Macaca mulatta ENSMMUG00000009411 N 0.845
LARP1 Macropus eugenii ENSMEUG00000002957 N 0.845
LARP1B Meleagris gallopavo ENSMGAG00000004809 N 0.793
LARP1 Meleagris gallopavo ENSMGAG00000005696 N 0.845
LARP1 Microcebus murinus ENSMICG00000000837 N 0.845
LARP1 Monodelphis domestica ENSMODG00000008663 N 0.845
LARP1B Monodelphis domestica ENSMODG00000012300 N 0.879
Larp1b Mus musculus ENSMUSG00000037814 N 0.845
Larp1 Mus musculus ENSMUSG00000037331 N 0.845
LARP1 Myotis lucifugus ENSMLUG00000002608 N 0.845
LARP1B Myotis lucifugus ENSMLUG00000010229 N 0.845
nasonia_NCBI_hmm577234 Nasonia vitripennis nasonia_NCBI_hmm577234 N 0.776
LARP1B Ochotona princeps ENSOPRG00000005478 N 0.845
LARP1 Ochotona princeps ENSOPRG00000013014 N 0.845
LARP1 Ornithorhynchus anatinus ENSOANG00000005096 N 0.879
LARP1 Oryctolagus cuniculus ENSOCUG00000013066 N 0.845
LARP1B Oryctolagus cuniculus ENSOCUG00000013330 N 0.845
LARP1B Oryzias latipes ENSORLG00000017954 N 0.810
LARP1 Oryzias latipes ENSORLG00000000824 N 0.897
LARP1B Otolemur garnettii ENSOGAG00000005771 N 0.845
LARP1 Otolemur garnettii ENSOGAG00000016750 N 0.845
LARP1 Pan troglodytes ENSPTRG00000017447 N 0.845
LOC742664 Pan troglodytes ENSPTRG00000016437 N 0.810
LARP1 Procavia capensis ENSPCAG00000006407 N 0.845
LARP1B Procavia capensis ENSPCAG00000007546 N 0.810
LARP1 Pteropus vampyrus ENSPVAG00000002262 N 0.845
LARP1B Pteropus vampyrus ENSPVAG00000005373 N 0.845
Larp1b Rattus norvegicus ENSRNOG00000038366 N 0.845
Larp1 Rattus norvegicus ENSRNOG00000031544 N 0.845
LARP1 Sorex araneus ENSSARG00000013907 N 0.759
LARP1 Spermophilus tridecemlineatus ENSSTOG00000005678 N 0.845
LARP1B Sus scrofa ENSSSCG00000009073 N 0.845
LARP1 Sus scrofa ENSSSCG00000017069 N 0.845
LARP1 Taeniopygia guttata ENSTGUG00000000704 N 0.845
LARP2 Taeniopygia guttata ENSTGUG00000002098 N 0.828
LARP1B Takifugu rubripes ENSTRUG00000005612 N 0.828
LARP1 Tarsius syrichta ENSTSYG00000013732 N 0.845
LARP1B Tarsius syrichta ENSTSYG00000002037 N 0.810
LARP1B Tetraodon nigroviridis ENSTNIG00000012398 N 0.845
LARP1 Tupaia belangeri ENSTBEG00000003381 N 0.759
LARP1B Tupaia belangeri ENSTBEG00000004177 N 0.776
LARP1B Tursiops truncatus ENSTTRG00000012984 N 0.845
LARP1 Tursiops truncatus ENSTTRG00000015934 N 0.845
LARP1B Vicugna pacos ENSVPAG00000007223 N 0.845
AAI34816 Xenopus laevis AAI34816 N 0.776
AAH93491 Xenopus laevis AAH93491 N 0.810
AAH98998 Xenopus laevis AAH98998 N 0.741
larp1b Xenopus tropicalis ENSXETG00000022512 N 0.741
larp1 Xenopus tropicalis ENSXETG00000008413 N 0.862