CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP1
(
Erinaceus europaeus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSEEUG00000001065
T22739_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000000956
La
242
296
IKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIAFHRVQALTTDISLIFAXXX
Links
Other
La
family RBPs
Other
Erinaceus europaeus
RBPs
68 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP1
Tupaia belangeri
ENSTBEG00000003381
N
0.964
LARP1
Cavia porcellus
ENSCPOG00000003377
N
0.879
LARP1
Ochotona princeps
ENSOPRG00000013014
N
0.879
LARP1
Otolemur garnettii
ENSOGAG00000016750
N
0.879
LARP1
Tursiops truncatus
ENSTTRG00000015934
N
0.879
LARP1
Dasypus novemcinctus
ENSDNOG00000012073
N
0.879
LARP1
Pan troglodytes
ENSPTRG00000017447
N
0.879
LOC100393482
Callithrix jacchus
ENSCJAG00000004454
N
0.879
LARP1
Spermophilus tridecemlineatus
ENSSTOG00000005678
N
0.879
Ame_R005086
Ailuropoda melanoleuca
Ame_R005086
N
0.879
LARP1
Sus scrofa
ENSSSCG00000017069
N
0.879
Larp1
Rattus norvegicus
ENSRNOG00000031544
N
0.879
Larp1
Mus musculus
ENSMUSG00000037331
N
0.879
LARP1
Pteropus vampyrus
ENSPVAG00000002262
N
0.879
LARP1
Oryctolagus cuniculus
ENSOCUG00000013066
N
0.879
LARP1
Microcebus murinus
ENSMICG00000000837
N
0.879
ENSGGOG00000006048
Gorilla gorilla
ENSGGOG00000006048
N
0.879
ENSGGOG00000024102
Gorilla gorilla
ENSGGOG00000024102
N
0.879
LARP1
Canis familiaris
ENSCAFG00000017639
N
0.879
LARP1
Myotis lucifugus
ENSMLUG00000002608
N
0.879
LARP1
Equus caballus
ENSECAG00000017002
N
0.879
LARP1
Macaca mulatta
ENSMMUG00000009411
N
0.879
LARP1
Felis catus
ENSFCAG00000000592
N
0.879
Larp1
Dipodomys ordii
ENSDORG00000002897
N
0.879
LARP1
Homo sapiens
ENSG00000155506
N
0.879
LARP1
Loxodonta africana
ENSLAFG00000008991
N
0.862
LARP1
Echinops telfairi
ENSETEG00000020251
N
0.862
LARP1
Procavia capensis
ENSPCAG00000006407
N
0.862
LARP1
Bos taurus
ENSBTAG00000008443
N
0.862
LARP1
Taeniopygia guttata
ENSTGUG00000000704
N
0.828
LARP1
Meleagris gallopavo
ENSMGAG00000005696
N
0.828
LARP1
Tarsius syrichta
ENSTSYG00000013732
N
0.828
LARP1
Gallus gallus
ENSGALG00000004001
N
0.828
LARP1
Choloepus hoffmanni
ENSCHOG00000012716
N
0.807
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.793
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.776
LARP1
Sorex araneus
ENSSARG00000013907
N
0.776
LARP1B
Oryzias latipes
ENSORLG00000017954
N
0.776
LARP1
Macropus eugenii
ENSMEUG00000002957
N
0.759
larp1
Danio rerio
ENSDARG00000018434
N
0.759
LARP1
Monodelphis domestica
ENSMODG00000008663
N
0.759
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.741
AAH93491
Xenopus laevis
AAH93491
N
0.741
LARP1B
Tetraodon nigroviridis
ENSTNIG00000012398
N
0.741
LARP1B
Anolis carolinensis
ENSACAG00000011338
N
0.724
LARP1
Oryzias latipes
ENSORLG00000000824
N
0.724
LARP1B
Otolemur garnettii
ENSOGAG00000005771
N
0.724
LARP1B
Choloepus hoffmanni
ENSCHOG00000005354
N
0.724
LARP1B
Takifugu rubripes
ENSTRUG00000005612
N
0.724
LARP1
Takifugu rubripes
ENSTRUG00000009470
N
0.724
LOC100071865
Equus caballus
ENSECAG00000001088
N
0.707
LARP1B
Dasypus novemcinctus
ENSDNOG00000018765
N
0.707
LARP1B
Canis familiaris
ENSCAFG00000003831
N
0.707
LARP1B
Bos taurus
ENSBTAG00000012135
N
0.707
Larp1b
Rattus norvegicus
ENSRNOG00000038366
N
0.707
LARP1B
Monodelphis domestica
ENSMODG00000012300
N
0.707
Larp1b
Mus musculus
ENSMUSG00000037814
N
0.707
LARP1B
Myotis lucifugus
ENSMLUG00000010229
N
0.707
ENSLAFG00000008473
Loxodonta africana
ENSLAFG00000008473
N
0.707
LARP1B
Gasterosteus aculeatus
ENSGACG00000004609
N
0.707
LARP1B
Oryctolagus cuniculus
ENSOCUG00000013330
N
0.707
LARP1B
Ochotona princeps
ENSOPRG00000005478
N
0.707
LARP1B
Vicugna pacos
ENSVPAG00000007223
N
0.707
Ame_R010453
Ailuropoda melanoleuca
Ame_R010453
N
0.707
LARP1B
Tursiops truncatus
ENSTTRG00000012984
N
0.707
LARP1B
Sus scrofa
ENSSSCG00000009073
N
0.707
LARP1B
Pteropus vampyrus
ENSPVAG00000005373
N
0.707
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.707