amel4_ncbi_hmm6926 (Apis mellifera)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 amel4_ncbi_hmm6926 T26146_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm6926 RanBP ZF 69 97

Links

Other RanBP ZF family RBPs
Other Apis mellifera RBPs

98 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL008263 Aedes aegypti AAEL008263 N 0.862
Ame_R009996 Ailuropoda melanoleuca Ame_R009996 N 0.793
Ame_R002450 Ailuropoda melanoleuca Ame_R002450 N 0.724
YAF2 Anolis carolinensis ENSACAG00000003204 N 0.793
RYBP Anolis carolinensis ENSACAG00000014789 N 0.724
AGAP010288 Anopheles gambiae AGAP010288 N 0.931
Q0VC56_BOVIN Bos taurus ENSBTAG00000015025 N 0.793
gw.67.121.1 Branchiostoma floridae gw.67.121.1 N 0.759
fgenesh2_pg.scaffold_670000003 Branchiostoma floridae fgenesh2_pg.scaffold_670000003 N 0.759
LOC100393237 Callithrix jacchus ENSCJAG00000015125 N 0.724
LOC100410479 Callithrix jacchus ENSCJAG00000017762 N 0.793
RYBP Canis familiaris ENSCAFG00000006441 N 0.724
e_gw1.39.163.1 Capitella teleta e_gw1.39.163.1 N 0.759
YAF2 Cavia porcellus ENSCPOG00000015156 N 0.793
RYBP Choloepus hoffmanni ENSCHOG00000011528 N 0.724
YAF2 Choloepus hoffmanni ENSCHOG00000002266 N 0.793
CpipJ_CPIJ008195 Culex pipiens CpipJ_CPIJ008195 N 0.862
CPIJ008195 Culex quinquefasciatus CPIJ008195 N 0.862
yaf2 Danio rerio ENSDARG00000015966 N 0.759
fgenesh1_pg.C_scaffold_97000016 Daphnia pulex fgenesh1_pg.C_scaffold_97000016 N 0.897
RYBP Dasypus novemcinctus ENSDNOG00000015175 N 0.724
GF11639 Drosophila ananassae FBgn0088679 N 0.862
GG22783 Drosophila erecta FBgn0114948 N 0.862
GH19772 Drosophila grimshawi FBgn0127236 N 0.862
RYBP Drosophila melanogaster FBgn0034763 N 0.862
GI20311 Drosophila mojavensis FBgn0143047 N 0.862
GL11369 Drosophila persimilis FBgn0148978 N 0.828
GA11466-RA Drosophila pseudoobscura FBgn0071517 N 0.828
GM15940 Drosophila sechellia FBgn0170856 N 0.862
GD11693 Drosophila simulans FBgn0183433 N 0.862
GJ22038 Drosophila virilis FBgn0209152 N 0.862
GK21447 Drosophila willistoni FBgn0223439 N 0.862
GE14012 Drosophila yakuba FBgn0231642 N 0.862
YAF2 Echinops telfairi ENSETEG00000001634 N 0.759
LOC100062395 Equus caballus ENSECAG00000000266 N 0.724
YAF2 Erinaceus europaeus ENSEEUG00000004713 N 0.759
ENSEEUG00000011620 Erinaceus europaeus ENSEEUG00000011620 N 0.724
RYBP Gallus gallus ENSGALG00000007790 N 0.724
Q5ZKC5_CHICK Gallus gallus ENSGALG00000009540 N 0.793
YAF2 Gasterosteus aculeatus ENSGACG00000004103 N 0.759
RYBP Gasterosteus aculeatus ENSGACG00000011809 N 0.759
YAF2 Gorilla gorilla ENSGGOG00000007230 N 0.793
193935 Helobdella robusta 193935 N 0.724
RYBP Homo sapiens ENSG00000163602 N 0.724
YAF2 Homo sapiens ENSG00000015153 N 0.793
ISCW017896 Ixodes scapularis ISCW017896 N 0.897
YAF2 Loxodonta africana ENSLAFG00000014339 N 0.759
YAF2 Macaca mulatta ENSMMUG00000010868 N 0.793
RYBP Macaca mulatta ENSMMUG00000007128 N 0.724
YAF2 Macropus eugenii ENSMEUG00000012378 N 0.793
RYBP Microcebus murinus ENSMICG00000014365 N 0.724
RYBP Monodelphis domestica ENSMODG00000003921 N 0.724
YAF2 Monodelphis domestica ENSMODG00000008906 N 0.793
Rybp Mus musculus ENSMUSG00000072872 N 0.724
Yaf2 Mus musculus ENSMUSG00000022634 N 0.793
nasonia_NCBI_hmm137104 Nasonia vitripennis nasonia_NCBI_hmm137104 N 0.966
estExt_fgenesh1_pg.C_1000062 Nematostella vectensis estExt_fgenesh1_pg.C_1000062 N 0.862
YAF2 Oryctolagus cuniculus ENSOCUG00000007321 N 0.759
RYBP Oryctolagus cuniculus ENSOCUG00000011730 N 0.724
YAF2 Oryzias latipes ENSORLG00000013064 N 0.793
RYBP Otolemur garnettii ENSOGAG00000007809 N 0.724
RYBP Pan troglodytes ENSPTRG00000015105 N 0.724
YAF2 Pan troglodytes ENSPTRG00000004837 N 0.793
PHUM359160 Pediculus humanus PHUM359160 N 0.897
ENSPPYG00000004421 Pongo pygmaeus ENSPPYG00000004421 N 0.793
ENSPPYG00000013718 Pongo pygmaeus ENSPPYG00000013718 N 0.724
RYBP Pteropus vampyrus ENSPVAG00000012905 N 0.724
YAF2 Pteropus vampyrus ENSPVAG00000016833 N 0.793
Yaf2 Rattus norvegicus ENSRNOG00000004773 N 0.793
Rybp Rattus norvegicus ENSRNOG00000005353 N 0.724
RYBP Sorex araneus ENSSARG00000011312 N 0.724
YAF2 Spermophilus tridecemlineatus ENSSTOG00000007224 N 0.759
XP_780545.1 Strongylocentrotus purpuratus XP_780545.1 N 0.793
XP_001186443.1 Strongylocentrotus purpuratus XP_001186443.1 N 0.800
XP_001183392.1 Strongylocentrotus purpuratus XP_001183392.1 N 0.793
XP_001183014.1 Strongylocentrotus purpuratus XP_001183014.1 N 0.800
RYBP Taeniopygia guttata ENSTGUG00000009932 N 0.724
YAF2 Taeniopygia guttata ENSTGUG00000005817 N 0.828
RYBP Takifugu rubripes ENSTRUG00000009347 N 0.793
YAF2 Takifugu rubripes ENSTRUG00000016767 N 0.793
YAF2 Takifugu rubripes ENSTRUG00000016786 N 0.759
YAF2 Tetraodon nigroviridis ENSTNIG00000018505 N 0.793
YAF2 Tetraodon nigroviridis ENSTNIG00000015988 N 0.759
RYBP Tetraodon nigroviridis ENSTNIG00000007355 N 0.793
amel4_ncbi_hmm6926 Tribolium castaneum amel4_ncbi_hmm6926 N 1.000
gw1.4.569.1 Trichoplax adhaerens gw1.4.569.1 N 0.759
RYBP Tupaia belangeri ENSTBEG00000003789 N 0.724
YAF2 Tursiops truncatus ENSTTRG00000001376 N 0.793
RYBP Tursiops truncatus ENSTTRG00000005375 N 0.724
RYBP Vicugna pacos ENSVPAG00000007715 N 0.724
YAF2 Vicugna pacos ENSVPAG00000012039 N 0.793
AAI55956 Xenopus laevis AAI55956 N 0.724
AAI69358 Xenopus laevis AAI69358 N 0.724
AAI06269 Xenopus laevis AAI06269 N 0.793
AAH73220 Xenopus laevis AAH73220 N 0.793
AAI69386 Xenopus laevis AAI69386 N 0.724
yaf2 Xenopus tropicalis ENSXETG00000006795 N 0.793
rybp Xenopus tropicalis ENSXETG00000015914 N 0.724