fgenesh2_pg.scaffold_670000003 (Branchiostoma floridae)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 fgenesh2_pg.scaffold_670000003 T27505_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_670000003 RanBP ZF 423 449

Links

Other RanBP ZF family RBPs
Other Branchiostoma floridae RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw.67.121.1 Branchiostoma floridae gw.67.121.1 N 1.000
YAF2 Macaca mulatta ENSMMUG00000010868 N 0.889
Yaf2 Mus musculus ENSMUSG00000022634 N 0.889
YAF2 Macropus eugenii ENSMEUG00000012378 N 0.889
YAF2 Gorilla gorilla ENSGGOG00000007230 N 0.889
YAF2 Cavia porcellus ENSCPOG00000015156 N 0.889
YAF2 Homo sapiens ENSG00000015153 N 0.889
Q5ZKC5_CHICK Gallus gallus ENSGALG00000009540 N 0.889
ENSPPYG00000004421 Pongo pygmaeus ENSPPYG00000004421 N 0.889
YAF2 Pan troglodytes ENSPTRG00000004837 N 0.889
RYBP Takifugu rubripes ENSTRUG00000009347 N 0.889
YAF2 Tursiops truncatus ENSTTRG00000001376 N 0.889
YAF2 Vicugna pacos ENSVPAG00000012039 N 0.889
RYBP Tetraodon nigroviridis ENSTNIG00000007355 N 0.889
YAF2 Taeniopygia guttata ENSTGUG00000005817 N 0.889
YAF2 Pteropus vampyrus ENSPVAG00000016833 N 0.889
Yaf2 Rattus norvegicus ENSRNOG00000004773 N 0.889
LOC100410479 Callithrix jacchus ENSCJAG00000017762 N 0.889
YAF2 Monodelphis domestica ENSMODG00000008906 N 0.889
YAF2 Anolis carolinensis ENSACAG00000003204 N 0.889
Ame_R009996 Ailuropoda melanoleuca Ame_R009996 N 0.889
Q0VC56_BOVIN Bos taurus ENSBTAG00000015025 N 0.889
YAF2 Choloepus hoffmanni ENSCHOG00000002266 N 0.889
fgenesh1_pg.C_scaffold_97000016 Daphnia pulex fgenesh1_pg.C_scaffold_97000016 N 0.857
RYBP Choloepus hoffmanni ENSCHOG00000011528 N 0.852
RYBP Pteropus vampyrus ENSPVAG00000012905 N 0.852
RYBP Otolemur garnettii ENSOGAG00000007809 N 0.852
RYBP Pan troglodytes ENSPTRG00000015105 N 0.852
RYBP Oryctolagus cuniculus ENSOCUG00000011730 N 0.852
RYBP Monodelphis domestica ENSMODG00000003921 N 0.852
Rybp Mus musculus ENSMUSG00000072872 N 0.852
YAF2 Oryctolagus cuniculus ENSOCUG00000007321 N 0.852
AAI06269 Xenopus laevis AAI06269 N 0.852
RYBP Sorex araneus ENSSARG00000011312 N 0.852
Ame_R002450 Ailuropoda melanoleuca Ame_R002450 N 0.852
yaf2 Xenopus tropicalis ENSXETG00000006795 N 0.852
rybp Xenopus tropicalis ENSXETG00000015914 N 0.852
RYBP Tursiops truncatus ENSTTRG00000005375 N 0.852
RYBP Taeniopygia guttata ENSTGUG00000009932 N 0.852
RYBP Macaca mulatta ENSMMUG00000007128 N 0.852
RYBP Tupaia belangeri ENSTBEG00000003789 N 0.852
AAH73220 Xenopus laevis AAH73220 N 0.852
Rybp Rattus norvegicus ENSRNOG00000005353 N 0.852
ENSPPYG00000013718 Pongo pygmaeus ENSPPYG00000013718 N 0.852
RYBP Gasterosteus aculeatus ENSGACG00000011809 N 0.852
RYBP Gallus gallus ENSGALG00000007790 N 0.852
RYBP Homo sapiens ENSG00000163602 N 0.852
LOC100062395 Equus caballus ENSECAG00000000266 N 0.852
RYBP Canis familiaris ENSCAFG00000006441 N 0.852
RYBP Dasypus novemcinctus ENSDNOG00000015175 N 0.852
RYBP Anolis carolinensis ENSACAG00000014789 N 0.852
ENSEEUG00000011620 Erinaceus europaeus ENSEEUG00000011620 N 0.852
RYBP Microcebus murinus ENSMICG00000014365 N 0.852
LOC100393237 Callithrix jacchus ENSCJAG00000015125 N 0.852
YAF2 Loxodonta africana ENSLAFG00000014339 N 0.852
RYBP Loxodonta africana ENSLAFG00000003133 N 0.815
YAF2 Erinaceus europaeus ENSEEUG00000004713 N 0.815
YAF2 Takifugu rubripes ENSTRUG00000016786 N 0.815
ENSMLUG00000015085 Myotis lucifugus ENSMLUG00000015085 N 0.815
rybpb Danio rerio ENSDARG00000053459 N 0.815
yaf2 Danio rerio ENSDARG00000015966 N 0.815
RYBP Vicugna pacos ENSVPAG00000007715 N 0.815
YAF2 Spermophilus tridecemlineatus ENSSTOG00000007224 N 0.815
YAF2 Tetraodon nigroviridis ENSTNIG00000015988 N 0.815
YAF2 Gasterosteus aculeatus ENSGACG00000004103 N 0.815
RYBP Echinops telfairi ENSETEG00000015145 N 0.815
YAF2 Echinops telfairi ENSETEG00000001634 N 0.786
AAI69358 Xenopus laevis AAI69358 N 0.786
AAI55956 Xenopus laevis AAI55956 N 0.786
AAI69386 Xenopus laevis AAI69386 N 0.786
ENSMUSG00000055763 Mus musculus ENSMUSG00000055763 N 0.786
YAF2 Oryzias latipes ENSORLG00000013064 N 0.778
rybpa Danio rerio ENSDARG00000037773 N 0.778
YAF2 Takifugu rubripes ENSTRUG00000016767 N 0.778
YAF2 Tetraodon nigroviridis ENSTNIG00000018505 N 0.778
estExt_fgenesh1_pg.C_1000062 Nematostella vectensis estExt_fgenesh1_pg.C_1000062 N 0.759
amel4_ncbi_hmm6926 Tribolium castaneum amel4_ncbi_hmm6926 N 0.759
amel4_ncbi_hmm6926 Apis mellifera amel4_ncbi_hmm6926 N 0.759
GI20311 Drosophila mojavensis FBgn0143047 N 0.750
GH19772 Drosophila grimshawi FBgn0127236 N 0.750
GK21447 Drosophila willistoni FBgn0223439 N 0.750
GM15940 Drosophila sechellia FBgn0170856 N 0.750
GD11693 Drosophila simulans FBgn0183433 N 0.750
GG22783 Drosophila erecta FBgn0114948 N 0.750
AGAP010288 Anopheles gambiae AGAP010288 N 0.750
GJ22038 Drosophila virilis FBgn0209152 N 0.750
GF11639 Drosophila ananassae FBgn0088679 N 0.750
RYBP Drosophila melanogaster FBgn0034763 N 0.750
GE14012 Drosophila yakuba FBgn0231642 N 0.750
193935 Helobdella robusta 193935 N 0.741
XP_780545.1 Strongylocentrotus purpuratus XP_780545.1 N 0.741
YAF2 Oryzias latipes ENSORLG00000003255 N 0.741
XP_001183392.1 Strongylocentrotus purpuratus XP_001183392.1 N 0.741
nasonia_NCBI_hmm137104 Nasonia vitripennis nasonia_NCBI_hmm137104 N 0.724
GA11466-RA Drosophila pseudoobscura FBgn0071517 N 0.714
GL11369 Drosophila persimilis FBgn0148978 N 0.714