CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GH20335
(
Drosophila grimshawi
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
FBgn0127799
T26950_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0154241
RanBP ZF
20
51
SAGDWICPDIDCRHSNFARRLQCNKCNRERES
FBpp0154241
RanBP ZF
99
128
SAEDWQCSKCANVNWARRQTCNMCNAPKFT
Links
Other
RanBP ZF
family RBPs
Other
Drosophila grimshawi
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DGIL_AUG5s21g11t1
Acyrtosiphon pisum
DGIL_AUG5s21g11t1
N
0.726
AAEL011285
Aedes aegypti
AAEL011285
N
0.726
GF13007
Drosophila ananassae
FBgn0090040
N
0.887
GG21779
Drosophila erecta
FBgn0113957
N
0.871
CG3732
Drosophila melanogaster
FBgn0034750
N
0.871
GI20006
Drosophila mojavensis
FBgn0142742
N
0.968
GL10466
Drosophila persimilis
FBgn0148076
N
0.823
GA17648-RA
Drosophila pseudoobscura
FBgn0077659
N
0.823
GD25119
Drosophila simulans
FBgn0196431
N
0.871
GJ21255
Drosophila virilis
FBgn0208388
N
0.968
GK17903
Drosophila willistoni
FBgn0219902
N
0.806
GE11855
Drosophila yakuba
FBgn0229641
N
0.871