CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GE11855
(
Drosophila yakuba
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
FBgn0229641
T27005_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0256865
RanBP ZF
20
49
SPGDWICPDYDCRHLNFARRLQCNKCDRDR
FBpp0256865
RanBP ZF
102
131
SAEDWQCSKCANVNWARRQTCNMCNAPKFS
Links
Other
RanBP ZF
family RBPs
Other
Drosophila yakuba
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
amel4_ncbi_hmm2546
Apis mellifera
amel4_ncbi_hmm2546
N
0.000
BGIBMGA013975
Bombyx mori
BGIBMGA013975
N
0.000
GF13506
Drosophila ananassae
FBgn0090535
N
0.000
GG20457
Drosophila erecta
FBgn0112647
N
0.000
GH19749
Drosophila grimshawi
FBgn0127213
N
0.000
CG17386
Drosophila melanogaster
FBgn0033936
N
0.000
GI20285
Drosophila mojavensis
FBgn0143021
N
0.000
GL10694
Drosophila persimilis
FBgn0148304
N
0.000
GA14498-RA
Drosophila pseudoobscura
FBgn0074526
N
0.000
GM21546
Drosophila sechellia
FBgn0176426
N
0.000
GD11054
Drosophila simulans
FBgn0182814
N
0.000
GJ22012
Drosophila virilis
FBgn0209126
N
0.000
GE13588
Drosophila yakuba
FBgn0231250
N
0.000