ML2 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT2G42890-TAIR-G T32710_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT2G42890.1-P RRM 200 265
AT2G42890.1-P RRM 285 350
AT2G42890.1-P RRM 682 752
AT2G42890.2-P RRM 187 252
AT2G42890.2-P RRM 272 337
AT2G42890.2-P RRM 669 739
AT2G42890.3-P RRM 187 252
AT2G42890.3-P RRM 272 337
AT2G42890.3-P RRM 669 739

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002893514.1 Arabidopsis lyrata Al_scaffold_0001_2998 N 0.701
XM_002879963.1 Arabidopsis lyrata Al_scaffold_0004_2944 N 0.922
ML5 Arabidopsis thaliana AT1G29400-TAIR-G N 0.706
BRADI3G44380 Brachypodium distachyon BRADI3G44380 N 0.701
BRADI1G52280 Brachypodium distachyon BRADI1G52280 N 0.725
PK15886.1 Cannabis sativa PK15886.1 N 0.706
PK25465.1 Cannabis sativa PK25465.1 N 0.745
PK24656.1 Cannabis sativa PK24656.1 N 0.730
Cucsa.047430 Cucumis sativus Cucsa.047430 N 0.725
Cucsa.185450 Cucumis sativus Cucsa.185450 N 0.732
Cucsa.349210 Cucumis sativus Cucsa.349210 N 0.706
Glyma15g23420.1 Glycine max Glyma15g23420.1 N 0.740
Glyma08g42230.1 Glycine max Glyma08g42230.1 N 0.745
Glyma09g11630.1 Glycine max Glyma09g11630.1 N 0.734
Glyma18g12730.1 Glycine max Glyma18g12730.1 N 0.745
chr6.CM0037.1500.nc Lotus japonicus chr6.CM0037.1500.nc N 0.754
cassava42354.valid.m1 Manihot esculenta cassava42354.valid.m1 N 0.735
cassava42353.valid.m1 Manihot esculenta cassava42353.valid.m1 N 0.735
cassava42352.valid.m1 Manihot esculenta cassava42352.valid.m1 N 0.735
cassava12910.valid.m1 Manihot esculenta cassava12910.valid.m1 N 0.706
cassava44897.m1 Manihot esculenta cassava44897.m1 N 0.735
cassava42355.valid.m1 Manihot esculenta cassava42355.valid.m1 N 0.735
cassava6429.valid.m1 Manihot esculenta cassava6429.valid.m1 N 0.730
Medtr2g056620 Medicago truncatula Medtr2g056620 N 0.739
mgf000415m Mimulus guttatus mgf000415m N 0.711
mgf005765m Mimulus guttatus mgf005765m N 0.732
mgf014747m Mimulus guttatus mgf014747m N 0.741
mgf015667m Mimulus guttatus mgf015667m N 0.711
BGIOSIBCE008451 Oryza indica BGIOSIBCE008451 N 0.707
LOC_Os02g48790 Oryza sativa LOC_Os02g48790 N 0.707
estExt_gwp_gw1.C_780034 Physcomitrella patens estExt_gwp_gw1.C_780034 N 0.725
e_gw1.78.82.1 Physcomitrella patens e_gw1.78.82.1 N 0.725
e_gw1.271.39.1 Physcomitrella patens e_gw1.271.39.1 N 0.730
B9GT36_POPTR Populus trichocarpa POPTR_0002s06070 N 0.730
B9H813_POPTR Populus trichocarpa POPTR_0005s22370 N 0.721
ppa000845m Prunus persica ppa000845m N 0.721
ppa000997m Prunus persica ppa000997m N 0.725
ppa001307m Prunus persica ppa001307m N 0.740
ppa001327m Prunus persica ppa001327m N 0.740
29693.m002077 Ricinus communis 29693.m002077 N 0.730
30147.m014409 Ricinus communis 30147.m014409 N 0.716
28350.m000106 Ricinus communis 28350.m000106 N 0.735
estExt_fgenesh2_pg.C_120305 Selaginella moellendorfii estExt_fgenesh2_pg.C_120305 N 0.724
e_gw1.12.24.1 Selaginella moellendorfii e_gw1.12.24.1 N 0.716
SB10G000350 Sorghum bicolor Sb10g000350 N 0.725
GSVIVG00001086001 Vitis vinifera GSVIVG00001086001 N 0.725
GSVIVG00008646001 Vitis vinifera GSVIVG00008646001 N 0.735
GSVIVG00021379001 Vitis vinifera GSVIVG00021379001 N 0.740
GRMZM2G004455 Zea mays GRMZM2G004455 N 0.730
GRMZM2G154229 Zea mays GRMZM2G154229 N 0.716