CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFUA_6G06490
(
Aspergillus fumigatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADAFUAG00001761
T33478_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00001761
RRM
107
178
LYCTNLPDKLRKYDLRLSLYTLFSTYGTVLDVVAMKTEKMRGQAHIVFKDVQASTQAMRALQGFEFFGKEMV
Links
Other
RRM
family RBPs
Other
Aspergillus fumigatus
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TOE1
Gasterosteus aculeatus
ENSGACG00000014339
N
0.000
TOE1
Oryzias latipes
ENSORLG00000012609
N
0.000
TOE1
Takifugu rubripes
ENSTRUG00000004628
N
0.000