An02g12270 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00002750 T33539_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00002677 RRM 4 74

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02963.1 Alternaria brassicicola AB02963.1 N 0.718
ARB_03747 Arthroderma benhamiae ARB_03747 N 0.740
e_gw1.00866.790.1 Aspergillus carbonarius e_gw1.00866.790.1 N 0.789
ACLA_036560 Aspergillus clavatus CADACLAG00003885 N 0.789
AFLA_086540 Aspergillus flavus CADAFLAG00001433 N 0.761
AFUA_3G08580 Aspergillus fumigatus CADAFUAG00005852 N 0.817
ANIA_02989 Aspergillus nidulans CADANIAG00010091 N 0.859
AO090005001419 Aspergillus oryzae CADAORAG00003299 N 0.761
BDBG_01954 Blastomyces dermatitidis BDBG_01954 N 0.873
CIMG_07653 Coccidioides immitis CIMG_07653 N 0.845
CPSG_09452 Coccidioides posadasii CPSG_09452 N 0.845
estExt_Genewise1Plus.C_31070 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_31070 N 0.732
MCYG_06115 Microsporum canis MCYG_06115 N 0.845
MGYG_01973 Microsporum gypseum MGYG_01973 N 0.887
estExt_Genewise1Plus.C_70764 Mycosphaerella fijiensis estExt_Genewise1Plus.C_70764 N 0.704
estExt_fgenesh1_kg.C_chr_50164 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_50164 N 0.746
NFIA_068550 Neosartorya fischeri CADNFIAG00006348 N 0.817
PABG_01590 Paracoccidioides brasiliensis PABG_01590 N 0.859
Pc20g03510 Penicillium chrysogenum Pc20g03510 N 0.746
Pc06g01290 Penicillium chrysogenum Pc06g01290 N 0.704
PMAA_013050 Penicillium marneffei PMAA_013050 N 0.789
PTRG_07976 Pyrenophora tritici repentis PTRG_07976 N 0.732
SNOG_04431 Stagonospora nodorum SNOG_04431 N 0.746
TERG_04706 Trichophyton rubrum TERG_04706 N 0.887
TESG_06069 Trichophyton tonsurans TESG_06069 N 0.887
UREG_07630 Uncinocarpus reesii UREG_07630 N 0.901