RBM46 (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000001696 T34765_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.995
ENSGALG00000014267
M234_0.6 		Gallus gallus GAUGAW RNAcompete
Ray et al.(2013)
RNCMPT00279 		0.725
ENSXETG00000012802
M235_0.6 		Xenopus tropicalis GAUGAWH RNAcompete
Ray et al.(2013)
RNCMPT00280 		0.721
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000002223 RRM 63 130
ENSBTAP00000002223 RRM 143 210
ENSBTAP00000002223 RRM 238 302

Links

Other RRM family RBPs
Other Bos taurus RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.15.448.1 Agaricus bisporus gw1.15.448.1 N 0.000
estExt_Genewise1Plus.C_41602 Agaricus bisporus estExt_Genewise1Plus.C_41602 N 0.000
estExt_Genewise1Plus.C_41557 Agaricus bisporus estExt_Genewise1Plus.C_41557 N 0.000
estExt_Genewise1Plus.C_30058 Agaricus bisporus estExt_Genewise1Plus.C_30058 N 0.000
estExt_Genewise1Plus.C_240008 Agaricus bisporus estExt_Genewise1Plus.C_240008 N 0.000
estExt_Genewise1Plus.C_21362 Agaricus bisporus estExt_Genewise1Plus.C_21362 N 0.000
estExt_Genewise1Plus.C_190041 Agaricus bisporus estExt_Genewise1Plus.C_190041 N 0.000
estExt_Genewise1Plus.C_180004 Agaricus bisporus estExt_Genewise1Plus.C_180004 N 0.000
estExt_Genewise1Plus.C_170202 Agaricus bisporus estExt_Genewise1Plus.C_170202 N 0.000
estExt_Genewise1Plus.C_160037 Agaricus bisporus estExt_Genewise1Plus.C_160037 N 0.000
estExt_Genewise1Plus.C_150138 Agaricus bisporus estExt_Genewise1Plus.C_150138 N 0.000
estExt_Genewise1Plus.C_50161 Agaricus bisporus estExt_Genewise1Plus.C_50161 N 0.000
estExt_Genewise1Plus.C_50705 Agaricus bisporus estExt_Genewise1Plus.C_50705 N 0.000
estExt_Genewise1Plus.C_51714 Agaricus bisporus estExt_Genewise1Plus.C_51714 N 0.000
Genemark.9626_g Agaricus bisporus Genemark.9626_g N 0.000
Genemark.6596_g Agaricus bisporus Genemark.6596_g N 0.000
Genemark.5195_g Agaricus bisporus Genemark.5195_g N 0.000
estExt_Genewise1Plus.C_90730 Agaricus bisporus estExt_Genewise1Plus.C_90730 N 0.000
estExt_Genewise1Plus.C_90717 Agaricus bisporus estExt_Genewise1Plus.C_90717 N 0.000
estExt_Genewise1Plus.C_90531 Agaricus bisporus estExt_Genewise1Plus.C_90531 N 0.000
estExt_Genewise1Plus.C_81032 Agaricus bisporus estExt_Genewise1Plus.C_81032 N 0.000
estExt_Genewise1Plus.C_80108 Agaricus bisporus estExt_Genewise1Plus.C_80108 N 0.000
estExt_Genewise1Plus.C_70406 Agaricus bisporus estExt_Genewise1Plus.C_70406 N 0.000
estExt_Genewise1Plus.C_51735 Agaricus bisporus estExt_Genewise1Plus.C_51735 N 0.000
estExt_Genewise1Plus.C_130360 Agaricus bisporus estExt_Genewise1Plus.C_130360 N 0.000
estExt_Genewise1Plus.C_110267 Agaricus bisporus estExt_Genewise1Plus.C_110267 N 0.000
e_gw1.13.687.1 Agaricus bisporus e_gw1.13.687.1 N 0.000
e_gw1.1.2998.1 Agaricus bisporus e_gw1.1.2998.1 N 0.000
e_gw1.1.2997.1 Agaricus bisporus e_gw1.1.2997.1 N 0.000
e_gw1.1.2995.1 Agaricus bisporus e_gw1.1.2995.1 N 0.000
e_gw1.12.818.1 Agaricus bisporus e_gw1.12.818.1 N 0.000
e_gw1.11.822.1 Agaricus bisporus e_gw1.11.822.1 N 0.000
e_gw1.10.994.1 Agaricus bisporus e_gw1.10.994.1 N 0.000
e_gw1.10.1118.1 Agaricus bisporus e_gw1.10.1118.1 N 0.000
e_gw1.2.2556.1 Agaricus bisporus e_gw1.2.2556.1 N 0.000
e_gw1.14.590.1 Agaricus bisporus e_gw1.14.590.1 N 0.000
e_gw1.2.2558.1 Agaricus bisporus e_gw1.2.2558.1 N 0.000
e_gw1.8.1263.1 Agaricus bisporus e_gw1.8.1263.1 N 0.000
e_gw1.9.1196.1 Agaricus bisporus e_gw1.9.1196.1 N 0.000
e_gw1.8.1265.1 Agaricus bisporus e_gw1.8.1265.1 N 0.000
e_gw1.9.1197.1 Agaricus bisporus e_gw1.9.1197.1 N 0.000
e_gw1.6.1492.1 Agaricus bisporus e_gw1.6.1492.1 N 0.000
e_gw1.6.1491.1 Agaricus bisporus e_gw1.6.1491.1 N 0.000
e_gw1.5.2042.1 Agaricus bisporus e_gw1.5.2042.1 N 0.000
e_gw1.5.2041.1 Agaricus bisporus e_gw1.5.2041.1 N 0.000
e_gw1.3.1898.1 Agaricus bisporus e_gw1.3.1898.1 N 0.000
e_gw1.3.1895.1 Agaricus bisporus e_gw1.3.1895.1 N 0.000
AT1G50810 Arabidopsis thaliana AT1G50810-TAIR-G N 0.000
AT2G15650 Arabidopsis thaliana AT2G15650-TAIR-G N 0.000
AT1G35115 Arabidopsis thaliana AT1G35115-TAIR-G N 0.000
MDP0000438504 Malus x domestica MDP0000438504 N 0.000