CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCSAVG00000010619
(
Ciona savignyi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCSAVG00000010619
T36018_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAVP00000018035
RRM
242
312
LFVCKLNAVTTDEDLEIIFSRFGTIVSCEIIRDYKTGDSLQYAFVEFEEAEMCEKAYEKMDNVLIDDRRIH
ENSCSAVP00000018036
RRM
219
289
LFVCKLNAVTTDEDLEIIFSRFGTIVSCEIIRDYKTGDSLQYAFVEFEEAEMCEKAYEKMDNVLIDDRRIH
Links
Other
RRM
family RBPs
Other
Ciona savignyi
RBPs
180 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MKRN2
Dasypus novemcinctus
ENSDNOG00000017476
N
0.000
MKRN2
Homo sapiens
ENSG00000075975
N
0.000
MKRN2
Macropus eugenii
ENSMEUG00000004347
N
0.000
MKRN2
Meleagris gallopavo
ENSMGAG00000005057
N
0.000
MKRN2
Microcebus murinus
ENSMICG00000012164
N
0.000
MKRN2
Monodelphis domestica
ENSMODG00000006280
N
0.000