CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PPIE
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000028312
T38127_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000026900
RRM
8
78
LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIR
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
88 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExtDG_fgeneshEH_pg.C_1020080
Emiliania huxleyi
estExtDG_fgeneshEH_pg.C_1020080
N
0.000
estExtDG_fgeneshEH_pg.C_710018
Emiliania huxleyi
estExtDG_fgeneshEH_pg.C_710018
N
0.000
PTTG_06000
Puccinia triticina
PTTG_06000
N
0.000
PTTG_06629
Puccinia triticina
PTTG_06629
N
0.000
PTTG_08342
Puccinia triticina
PTTG_08342
N
0.000