XR_011984.1 (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000011640 T38889_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.803
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.803
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.803
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.782
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000015274 RRM 10 77
ENSMMUP00000015274 RRM 99 166

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

231 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.722
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.806
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.700
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.792
LOC785445 Bos taurus ENSBTAG00000025621 I 0.771
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.738
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.700
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.806
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.750
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.745
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.703
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.700
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.785
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.746
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.779
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.771
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.799
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.799
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.715
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.776
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.755
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.764
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.743
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.754
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.743
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.806
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.750
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.708
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.757
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.778
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.778
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.700
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.750
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.806
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.806
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.708
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.764
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.764
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.764
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.789
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.771
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.743
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.806
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.754
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.750
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.768
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.771
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.728
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.757
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.776
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.764
ENSCAFG00000005307 Canis familiaris ENSCAFG00000005307 I 0.717
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.736
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.734
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.787
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.757
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.741
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.700
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.775
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.775
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.707
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.778
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.769
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.779
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.743
ENSCAFG00000020428 Canis familiaris ENSCAFG00000020428 I 0.721
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.780
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.787
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.769
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.724
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.732
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.762
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.755
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.757
ENSCAFG00000017448 Canis familiaris ENSCAFG00000017448 I 0.721
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.782
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.755
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.778
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.716
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.792
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.743
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.776
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.750
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.736
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.793
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.727
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.750
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.757
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.754
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.741
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.785
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.700
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.806
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.700
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.754
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.700
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.707
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.722
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.703
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.806
LOC100054206 Equus caballus ENSECAG00000006699 I 0.783
LOC100068539 Equus caballus ENSECAG00000000782 I 0.700
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.708
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.722
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.799
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.792
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.806
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.700
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.736
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.729
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.705
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.743
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.806
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.715
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.750
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.741
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.700
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.806
HNRNPA1 Homo sapiens ENSG00000135486 D 0.806
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.700
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.785
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.764
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.806
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.792
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.700
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.778
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.799
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.701
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.792
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.806
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.794
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.807
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.715
ENSMMUG00000022219 Macaca mulatta ENSMMUG00000022219 I 0.705
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.787
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.799
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.785
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.776
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.764
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.806
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.757
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.743
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.813
ENSMMUG00000001417 Macaca mulatta ENSMMUG00000001417 I 0.705
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.700
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.743
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.799
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.700
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.700
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.700
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.766
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.746
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.716
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.741
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.753
ENSMODG00000002376 Monodelphis domestica ENSMODG00000002376 I 0.709
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.700
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.700
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.778
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.806
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.700
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.792
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.769
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.806
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.799
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.700
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.799
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.700
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.806
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.799
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.792
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.792
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.806
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.778
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.806
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.750
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.785
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.806
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.715
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.799
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.716
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.786
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.806
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.806
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.806
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.700
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.806
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.792
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.764
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.700
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.711
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.700
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.806
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.785
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.806
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.764
D4AB76_RAT Rattus norvegicus ENSRNOG00000032584 I 0.711
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.761
ENSRNOG00000031316 Rattus norvegicus ENSRNOG00000031316 I 0.704
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.785
ENSRNOG00000029434 Rattus norvegicus ENSRNOG00000029434 I 0.707
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.750
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.764
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.700
ENSRNOG00000017651 Rattus norvegicus ENSRNOG00000017651 I 0.716
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.736
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.755
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.722
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.771
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.754
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.743
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.700
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.806
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.707
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.701
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.806
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.778
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.785
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.806
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.700
P17130 Xenopus laevis P17130 I 0.722
CBU92546 Xenopus laevis CBU92546 I 0.736
CBU92428 Xenopus laevis CBU92428 I 0.722
CBF67672 Xenopus laevis CBF67672 I 0.736
CBF67555 Xenopus laevis CBF67555 I 0.722
AAH72090 Xenopus laevis AAH72090 I 0.736
AAH45260 Xenopus laevis AAH45260 I 0.743
AAA49742 Xenopus laevis AAA49742 I 0.722
AAA49741 Xenopus laevis AAA49741 I 0.722
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.701
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.743