CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Cstf2
(
Mus musculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMUSG00000031256
T39312_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000033609
RRM
18
88
VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
ENSMUSP00000108911
RRM
18
88
VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
ENSMUSP00000108912
RRM
18
88
VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
ENSMUSP00000108916
RRM
22
72
GSFPALRLRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
ENSMUSP00000114837
RRM
22
72
GSFPALRLRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
Links
Other
RRM
family RBPs
Other
Mus musculus
RBPs
143 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSEEUG00000010991
Erinaceus europaeus
ENSEEUG00000010991
N
0.000
HNRNPH2
Erinaceus europaeus
ENSEEUG00000015697
N
0.000
HNRNPH1
Homo sapiens
ENSG00000169045
I
0.000
ENSMEUG00000014575
Macropus eugenii
ENSMEUG00000014575
N
0.000