CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSEEUG00000010991
(
Erinaceus europaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSEEUG00000010991
T36821_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000010011
RRM
4
51
QNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVE
ENSEEUP00000010011
RRM
80
149
VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIE
Links
Other
RRM
family RBPs
Other
Erinaceus europaeus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPH1
Tupaia belangeri
ENSTBEG00000012210
N
0.966
HNRNPH1
Homo sapiens
ENSG00000169045
I
0.831
HNRNPH2
Erinaceus europaeus
ENSEEUG00000015697
N
0.810
ENSMEUG00000014575
Macropus eugenii
ENSMEUG00000014575
N
0.763
hnrnph1
Danio rerio
ENSDARG00000040881
N
0.718