Tardbp (Mus musculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMUSG00000041459 T39355_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.917
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000038113 RRM 106 174
ENSMUSP00000038113 RRM 193 244
ENSMUSP00000060538 RRM 106 174
ENSMUSP00000060538 RRM 193 244
ENSMUSP00000081142 RRM 106 174
ENSMUSP00000081142 RRM 193 244
ENSMUSP00000093386 RRM 106 174
ENSMUSP00000093386 RRM 193 244
ENSMUSP00000101324 RRM 106 174
ENSMUSP00000101324 RRM 193 244
ENSMUSP00000101325 RRM 106 174
ENSMUSP00000101325 RRM 193 244

Links

Other RRM family RBPs
Other Mus musculus RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
chr4.CM0421.150.nd Lotus japonicus chr4.CM0421.150.nd N 0.000
LOC_Os01g62650 Oryza sativa LOC_Os01g62650 N 0.000
Sb07g026995 Sorghum bicolor Sb07g026995 N 0.000