chr4.CM0421.150.nd (Lotus japonicus)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 chr4.CM0421.150.nd T25058_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0421.150.nd PUF 611 643
chr4.CM0421.150.nd PUF 645 679
chr4.CM0421.150.nd PUF 681 716
chr4.CM0421.150.nd PUF 717 751
chr4.CM0421.150.nd PUF 754 788
chr4.CM0421.150.nd PUF 790 824
chr4.CM0421.150.nd PUF 826 860

Links

Other PUF family RBPs
Other Lotus japonicus RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.96.3.1 Physcomitrella patens e_gw1.96.3.1 N 0.721
Sb07g026995 Sorghum bicolor Sb07g026995 N 0.711