Sb07g026995 (Sorghum bicolor)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 Sb07g026995 T24453_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb07g026995.1 PUF 434 467
Sb07g026995.1 PUF 470 504
Sb07g026995.1 PUF 506 540
Sb07g026995.1 PUF 542 575
Sb07g026995.1 PUF 578 612
Sb07g026995.1 PUF 615 649
Sb07g026995.1 PUF 651 685
Sb07g026995.1 PUF 693 727
Sb07g026995.2 PUF 434 467
Sb07g026995.2 PUF 470 504
Sb07g026995.2 PUF 506 540
Sb07g026995.2 PUF 542 575
Sb07g026995.2 PUF 578 612
Sb07g026995.2 PUF 615 649
Sb07g026995.2 PUF 651 685

Links

Other PUF family RBPs
Other Sorghum bicolor RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G035118 Zea mays GRMZM2G035118 N 0.957
GRMZM2G449123 Zea mays GRMZM2G449123 N 0.932
BGIOSIBCE028530 Oryza indica BGIOSIBCE028530 N 0.921
LOC_Os08g40830 Oryza sativa LOC_Os08g40830 N 0.921
BRADI3G40520 Brachypodium distachyon BRADI3G40520 N 0.903
GSVIVG00029553001 Vitis vinifera GSVIVG00029553001 N 0.759
MDP0000277305 Malus x domestica MDP0000277305 N 0.758
Cucsa.149730 Cucumis sativus Cucsa.149730 N 0.754
B9HK27_POPTR Populus trichocarpa POPTR_0008s00490 N 0.751
LOC_Os09g32210 Oryza sativa LOC_Os09g32210 N 0.746
MDP0000265231 Malus x domestica MDP0000265231 N 0.746
GSVIVG00031557001 Vitis vinifera GSVIVG00031557001 N 0.746
PK12245.1 Cannabis sativa PK12245.1 N 0.746
30169.m006300 Ricinus communis 30169.m006300 N 0.744
ppa000898m Prunus persica ppa000898m N 0.742
ppa016404m Prunus persica ppa016404m N 0.741
cassava9350.m1 Manihot esculenta cassava9350.m1 N 0.740
MDP0000313902 Malus x domestica MDP0000313902 N 0.733
Glyma15g17680.1 Glycine max Glyma15g17680.1 N 0.728
cassava43126.valid.m1 Manihot esculenta cassava43126.valid.m1 N 0.724
Glyma09g06460.1 Glycine max Glyma09g06460.1 N 0.724
mgf006786m Mimulus guttatus mgf006786m N 0.723
POPTR_0022s00840 Populus trichocarpa POPTR_0022s00840 N 0.721
BRADI4G34110 Brachypodium distachyon BRADI4G34110 N 0.719
chr4.CM0421.150.nd Lotus japonicus chr4.CM0421.150.nd N 0.711
gw1.2.45.1 Selaginella moellendorfii gw1.2.45.1 N 0.709
mgf002285m Mimulus guttatus mgf002285m N 0.707
e_gw1.96.1.1 Physcomitrella patens e_gw1.96.1.1 N 0.706
Glyma13g00670.1 Glycine max Glyma13g00670.1 N 0.706
e_gw1.96.3.1 Physcomitrella patens e_gw1.96.3.1 N 0.704
estExt_Genewise1.C_960051 Physcomitrella patens estExt_Genewise1.C_960051 N 0.701