RBM42 (Pteropus vampyrus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPVAG00000012815 T40941_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		1.000
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.958
CG2931
M138_0.6 		Drosophila melanogaster DACUAAG RNAcompete
Ray et al.(2013)
RNCMPT00147 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000012084 RRM 380 450

Links

Other RRM family RBPs
Other Pteropus vampyrus RBPs

110 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GF13242 Drosophila ananassae FBgn0090274 N 0.000
GG21958 Drosophila erecta FBgn0114136 N 0.000
GH22714 Drosophila grimshawi FBgn0130171 N 0.000
Tab2 Drosophila melanogaster FBgn0086358 N 0.000
GI18499 Drosophila mojavensis FBgn0141238 N 0.000
GA20335-RA Drosophila pseudoobscura FBgn0080330 N 0.000
GM21946 Drosophila sechellia FBgn0176823 N 0.000
GD11443 Drosophila simulans FBgn0183192 N 0.000
GJ21362 Drosophila virilis FBgn0208490 N 0.000
GK10734 Drosophila willistoni FBgn0212746 N 0.000
GE12037 Drosophila yakuba FBgn0229811 N 0.000