pab-2 (Caenorhabditis elegans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 F18H3.3 T42971_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
F18H3.3a.1 RRM 59 129
F18H3.3a.1 RRM 147 216
F18H3.3a.1 RRM 240 309
F18H3.3a.1 RRM 345 414
F18H3.3a.2 RRM 59 129
F18H3.3a.2 RRM 147 216
F18H3.3a.2 RRM 240 309
F18H3.3a.2 RRM 345 414
F18H3.3a.3 RRM 59 129
F18H3.3a.3 RRM 147 216
F18H3.3a.3 RRM 240 309
F18H3.3a.3 RRM 345 414
F18H3.3a.4 RRM 59 129
F18H3.3a.4 RRM 147 216
F18H3.3a.4 RRM 240 309
F18H3.3a.4 RRM 345 414
F18H3.3b RRM 59 129
F18H3.3b RRM 147 216
F18H3.3b RRM 240 309
F18H3.3b RRM 345 414

Links

Other RRM family RBPs
Other Caenorhabditis elegans RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GF20968 Drosophila ananassae FBgn0097973 I 0.000
GG17637 Drosophila erecta FBgn0109859 I 0.000
GH24172 Drosophila grimshawi FBgn0131628 I 0.000
Sxl Drosophila melanogaster FBgn0003659 D 0.000
GI21573 Drosophila mojavensis FBgn0144303 I 0.000
GL26885 Drosophila persimilis FBgn0164466 I 0.000
GA22653-RA Drosophila pseudoobscura FBgn0244056 I 0.000
Sxl Drosophila sechellia FBgn0043405 I 0.000
GD16553 Drosophila simulans FBgn0188158 N 0.000
Sxl Drosophila virilis FBgn0016470 I 0.000
GK16445 Drosophila willistoni FBgn0218447 I 0.000
GE17544 Drosophila yakuba FBgn0235003 I 0.000