pab-2 (Caenorhabditis elegans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 F18H3.3 T42971_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
F18H3.3a.1 RRM 59 129
F18H3.3a.1 RRM 147 216
F18H3.3a.1 RRM 240 309
F18H3.3a.1 RRM 345 414
F18H3.3a.2 RRM 59 129
F18H3.3a.2 RRM 147 216
F18H3.3a.2 RRM 240 309
F18H3.3a.2 RRM 345 414
F18H3.3a.3 RRM 59 129
F18H3.3a.3 RRM 147 216
F18H3.3a.3 RRM 240 309
F18H3.3a.3 RRM 345 414
F18H3.3a.4 RRM 59 129
F18H3.3a.4 RRM 147 216
F18H3.3a.4 RRM 240 309
F18H3.3a.4 RRM 345 414
F18H3.3b RRM 59 129
F18H3.3b RRM 147 216
F18H3.3b RRM 240 309
F18H3.3b RRM 345 414

Links

Other RRM family RBPs
Other Caenorhabditis elegans RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBN18184 Caenorhabditis brenneri CBN18184 N 0.886
CRE22405 Caenorhabditis remanei CRE22405 N 0.883
CBG07431 Caenorhabditis briggsae CBG07431 N 0.872
CJA16600 Caenorhabditis japonica CJA16600 N 0.861
CJA17800 Caenorhabditis japonica CJA17800 N 0.765
pab-1 Caenorhabditis elegans Y106G6H.2 I 0.751
CBN04295 Caenorhabditis brenneri CBN04295 I 0.747
CBG02207 Caenorhabditis briggsae CBG02207 N 0.744
LOAG_01058 Loa loa LOAG_01058 I 0.719
Bm1_16080 Brugia malayi Bm1_16080 I 0.719
Bm1_06880 Brugia malayi Bm1_06880 I 0.715