LOC_Os04g50790 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os04g50790 T45026_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g50790.1 RRM 9 74
LOC_Os04g50790.2 RRM 9 73

Links

Other RRM family RBPs
Other Oryza sativa RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G67950 Arabidopsis thaliana AT1G67950-TAIR-G N 0.701
BRADI3G52270 Brachypodium distachyon BRADI3G52270 N 0.773
BRADI5G20150 Brachypodium distachyon BRADI5G20150 N 0.864
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.706
PK05006.1 Cannabis sativa PK05006.1 N 0.706
Cucsa.322000 Cucumis sativus Cucsa.322000 N 0.727
Glyma09g33960.1 Glycine max Glyma09g33960.1 N 0.731
Glyma01g01950.1 Glycine max Glyma01g01950.1 N 0.731
BGIOSIBCE020376 Oryza indica BGIOSIBCE020376 N 0.706
BGIOSIBCE016423 Oryza indica BGIOSIBCE016423 N 1.000
LOC_Os06g02240 Oryza sativa LOC_Os06g02240 N 0.706
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.701
SB04G031100 Sorghum bicolor Sb04g031100 N 0.742
SB06G027200 Sorghum bicolor Sb06g027200 N 0.879
SB10G000940 Sorghum bicolor Sb10g000940 N 0.706
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.706
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.721
GRMZM2G035719 Zea mays GRMZM2G035719 N 0.909
GRMZM2G051890 Zea mays GRMZM2G051890 N 0.706
GRMZM2G414304 Zea mays GRMZM2G414304 N 0.773