cassava18017.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava18017.valid.m1 T49149_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava18017.valid.m1 RRM 54 119

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK02111.1 Cannabis sativa PK02111.1 N 0.718
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.775
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.775
MDP0000340057 Malus x domestica MDP0000340057 N 0.761
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.789
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.775
mgf009918m Mimulus guttatus mgf009918m N 0.718
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.704
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.859
ppa025985m Prunus persica ppa025985m N 0.803
29428.m000321 Ricinus communis 29428.m000321 N 0.873
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.746