Medtr1g137330 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr1g137330 T54444_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr1g137330.1 RRM 55 125

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.958
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.944
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.944
ppa025985m Prunus persica ppa025985m N 0.873
MDP0000340057 Malus x domestica MDP0000340057 N 0.859
29428.m000321 Ricinus communis 29428.m000321 N 0.859
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.845
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.831
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.817
PK02111.1 Cannabis sativa PK02111.1 N 0.789
cassava18017.valid.m1 Manihot esculenta cassava18017.valid.m1 N 0.789
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.775
RO3G_08088 Rhizopus oryzae RO3G_08088 N 0.775
mgf009918m Mimulus guttatus mgf009918m N 0.775
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.775
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.761
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.746
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.746
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.732
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.732
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.732
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.718
AT5G04600 Arabidopsis thaliana AT5G04600-TAIR-G N 0.718
SOCG_03680 Schizosaccharomyces octosporus SOCG_03680 N 0.704
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.704
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.704
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.704
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.704
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.704