estExt_Genewise1Plus.C_chr_40253 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_chr_40253 T51524_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_chr_40253 RRM 85 155

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB06486.1 Alternaria brassicicola AB06486.1 N 0.831
ARB_04443 Arthroderma benhamiae ARB_04443 N 0.000
fgenesh1_pm.00771_#_149 Aspergillus carbonarius fgenesh1_pm.00771_#_149 N 0.732
ACLA_006960 Aspergillus clavatus CADACLAG00000697 N 0.718
AFLA_075060 Aspergillus flavus CADAFLAG00000288 N 0.732
AFUA_7G05260 Aspergillus fumigatus CADAFUAG00009507 N 0.732
ANIA_06676 Aspergillus nidulans CADANIAG00007461 N 0.718
An07g02990 Aspergillus niger CADANGAG00005571 N 0.732
AO090005000269 Aspergillus oryzae CADAORAG00002284 N 0.732
ATEG_06451 Aspergillus terreus CADATEAG00007044 N 0.732
BDBG_04556 Blastomyces dermatitidis BDBG_04556 N 0.761
BC1G_05132 Botrytis cinerea BC1G_05132 N 0.831
CHGG_07146 Chaetomium globosum CHGG_07146 N 0.732
CIMG_04697 Coccidioides immitis CIMG_04697 N 0.704
CPSG_07669 Coccidioides posadasii CPSG_07669 N 0.704
estExt_fgenesh1_pg.C_40358 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40358 N 0.775
GLRG_01286 Colletotrichum graminicola GLRG_01286 N 0.817
estExt_Genewise1Plus.C_130074 Cryphonectria parasitica estExt_Genewise1Plus.C_130074 N 0.803
FGSG_01904 Fusarium graminearum FGSG_01904 N 0.803
FOXG_04224 Fusarium oxysporum FOXG_04224 N 0.789
FVEG_07344 Fusarium verticillioides FVEG_07344 N 0.789
HCAG_04664 Histoplasma capsulatum HCAG_04664 N 0.746
MGG_07511 Magnaporthe oryzae MGG_07511 N 0.831
MCYG_05842 Microsporum canis MCYG_05842 N 0.000
MGYG_06129 Microsporum gypseum MGYG_06129 N 0.732
estExt_fgenesh1_kg.C_30108 Myceliophthora thermophila estExt_fgenesh1_kg.C_30108 N 0.746
estExt_fgenesh1_pg.C_10219 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10219 N 0.901
estExt_Genewise1Plus.C_sca_14_chr10_3_00018 Nectria haematococca estExt_Genewise1Plus.C_sca_14_chr10_3_00018 N 0.775
NFIA_026460 Neosartorya fischeri CADNFIAG00002567 N 0.732
NCU04164 Neurospora crassa NCU04164 N 0.761
estExt_Genewise1Plus.C_12199 Neurospora discreta estExt_Genewise1Plus.C_12199 N 0.761
scaffold_1-snap.352.1 Neurospora tetrasperma scaffold_1-snap.352.1 N 0.761
PABG_06275 Paracoccidioides brasiliensis PABG_06275 N 0.746
Pc12g05910 Penicillium chrysogenum Pc12g05910 N 0.718
PMAA_052310 Penicillium marneffei PMAA_052310 N 0.704
EAT92286.2 Phaeosphaeria nodorum EAT92286.2 N 0.817
Pa_2_11080 Podospora anserina Pa_2_11080 N 0.732
PTRG_07268 Pyrenophora tritici repentis PTRG_07268 N 0.817
SS1G_07495 Sclerotinia sclerotiorum SS1G_07495 N 0.831
SNOG_00791 Stagonospora nodorum SNOG_00791 N 0.817
estExt_fgenesh2_pg.C_21066 Thielavia terrestris estExt_fgenesh2_pg.C_21066 N 0.704
gw1.13.356.1 Trichoderma atroviride gw1.13.356.1 N 0.775
estExt_Genewise1.C_180314 Trichoderma reesei estExt_Genewise1.C_180314 N 0.789
fgenesh1_pg.C_scaffold_28000022 Trichoderma virens fgenesh1_pg.C_scaffold_28000022 N 0.789
TEQG_06803 Trichophyton equinum TEQG_06803 N 0.718
TERG_06272 Trichophyton rubrum TERG_06272 N 0.718
TESG_06970 Trichophyton tonsurans TESG_06970 N 0.718
TRV_06236 Trichophyton verrucosum TRV_06236 N 0.718
VDBG_09339 Verticillium albo atrum VDBG_09339 N 0.817
VDAG_04577 Verticillium dahliae VDAG_04577 N 0.817