Medtr3g159840 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr3g159840 T54499_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.868
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr3g159840.1 RRM 31 97

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPN1 Choloepus hoffmanni ENSCHOG00000004798 N 0.000
ENSDNOG00000023682 Dasypus novemcinctus ENSDNOG00000023682 N 0.000
PABPN1L Homo sapiens ENSG00000205022 I 0.000
XP_002163279.1 Hydra magnipapillata XP_002163279.1 N 0.000
PABPN1 Microcebus murinus ENSMICG00000010002 N 0.000
PABPN1 Ochotona princeps ENSOPRG00000016461 N 0.000