CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MDP0000851531
(
Malus x domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MDP0000851531
T57730_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000851531
RRM
119
189
VYLGGIPHDASEVDLRGFCESIGEVTEVRIMKGKDSGEAKGYAFVTFRNKELASKAIEELNNSELKGKRIK
MDP0000851531
RRM
199
269
LFIGNVPRSWGEEDMKKAVTDIGPGVISVELLKDPQNSSRNRGFAFIEYYNHACAEYSRQKMSTPKFKLDT
MDP0000851531
RRM
293
363
VYVKNLPKDITQDQLKDLFEHHGKITKVVLPPAKAGQEKSRFGFVHFAERACAMKALKNTEKYEIDGQVLE
Links
Other
RRM
family RBPs
Other
Malus x domestica
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PABPC4L
Callithrix jacchus
ENSCJAG00000003241
I
0.000
PABPC4
Gallus gallus
ENSGALG00000003800
I
0.000
ENSG00000250177
Homo sapiens
ENSG00000250177
I
0.000
ENSMMUG00000007193
Macaca mulatta
ENSMMUG00000007193
N
0.000
ENSOANG00000010001
Ornithorhynchus anatinus
ENSOANG00000010001
I
0.000
PABPC4
Taeniopygia guttata
ENSTGUG00000001266
I
0.000
AAH73435
Xenopus laevis
AAH73435
I
0.000