CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMMUG00000007193
(
Macaca mulatta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMMUG00000007193
T38853_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000009425
RRM
2
72
LYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDTMNFDIIKGKSIR
ENSMMUP00000009425
RRM
90
158
VFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVF
ENSMMUP00000009425
RRM
182
233
IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFLKRERIRGY
ENSMMUP00000009425
RRM
238
306
LYVKNLDDTIDDEKLRNEFSSFGSIIRVKVMQQEGQSKGFGFICFSSLEDATKAMIEMNGCFLGSKPIS
Links
Other
RRM
family RBPs
Other
Macaca mulatta
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSG00000250177
Homo sapiens
ENSG00000250177
I
0.826
PABPC4L
Callithrix jacchus
ENSCJAG00000003241
I
0.816
Pabpc4l
Rattus norvegicus
ENSRNOG00000029749
N
0.705