PDK_20s1330821g002 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1330821g002 T58071_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1330821g002 RRM 22 78

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.761
PK05006.1 Cannabis sativa PK05006.1 N 0.716
MDP0000243576 Malus x domestica MDP0000243576 N 0.776
cassava28770.m1 Manihot esculenta cassava28770.m1 N 0.738
Medtr8g077770 Medicago truncatula Medtr8g077770 N 0.701
BGIOSIBCE020376 Oryza indica BGIOSIBCE020376 N 0.746
LOC_Os06g02240 Oryza sativa LOC_Os06g02240 N 0.746
PDK_20s1613681g001 Phoenix dactylifera PDK_20s1613681g001 N 0.731
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.716
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.727
SB10G000940 Sorghum bicolor Sb10g000940 N 0.746
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.731
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.731
GRMZM2G035719 Zea mays GRMZM2G035719 N 0.754
GRMZM2G051890 Zea mays GRMZM2G051890 N 0.731
GRMZM2G102808 Zea mays GRMZM2G102808 N 0.761